Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AC090621.1-201ENST00000592121 419 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGCS2P54868 COX6CP7-201ENST00000597056 208 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC7.12□□□□□ -1.27
HMGCS2P54868 AC119501.1-201ENST00000603646 475 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 AL160400.1-201ENST00000606385 1030 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 AL352984.2-201ENST00000611153 546 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 AC024255.1-201ENST00000614376 102 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 AL357562.1-201ENST00000624911 609 ntBASIC7.12□□□□□ -1.27
HMGCS2P54868 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 IFIT1-202ENST00000546318 4613 ntTSL 3 BASIC7.12□□□□□ -1.27
HMGCS2P54868 ZNF682-201ENST00000358523 2161 ntTSL 2 BASIC7.12□□□□□ -1.27
HMGCS2P54868 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGCS2P54868 CEACAM1-203ENST00000352591 3170 ntTSL 1 (best) BASIC7.12□□□□□ -1.27
HMGCS2P54868 NRXN1-211ENST00000406859 2553 ntTSL 5 BASIC7.12□□□□□ -1.27
HMGCS2P54868 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGCS2P54868 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGCS2P54868 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HMGCS2P54868 AC010894.3-202ENST00000412835 1405 ntTSL 2 BASIC7.11□□□□□ -1.27
HMGCS2P54868 CC2D2B-201ENST00000344386 1809 ntAPPRIS P3 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGCS2P54868 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC7.11□□□□□ -1.27
HMGCS2P54868 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.11□□□□□ -1.27
HMGCS2P54868 AC008937.3-201ENST00000606813 1700 ntBASIC7.11□□□□□ -1.27
HMGCS2P54868 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC7.11□□□□□ -1.27
HMGCS2P54868 RNA5SP350-201ENST00000363298 111 ntBASIC7.11□□□□□ -1.27
HMGCS2P54868 MYL12B-202ENST00000400175 1025 ntAPPRIS P1 TSL 3 BASIC7.11□□□□□ -1.27
HMGCS2P54868 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC7.11□□□□□ -1.27
HMGCS2P54868 GAS5-202ENST00000414075 413 ntTSL 2 BASIC7.11□□□□□ -1.27
HMGCS2P54868 AL513325.1-201ENST00000417716 1034 ntBASIC7.11□□□□□ -1.27
HMGCS2P54868 BX119321.1-201ENST00000428912 797 ntBASIC7.11□□□□□ -1.27
HMGCS2P54868 AL121759.1-201ENST00000434043 795 ntTSL 5 BASIC7.11□□□□□ -1.27
HMGCS2P54868 CASP5-205ENST00000444749 1237 ntAPPRIS P1 TSL 2 BASIC7.11□□□□□ -1.27
HMGCS2P54868 MIS18A-AS1-201ENST00000453549 769 ntTSL 5 BASIC7.11□□□□□ -1.27
HMGCS2P54868 SNX18P26-201ENST00000458433 740 ntBASIC7.11□□□□□ -1.27
HMGCS2P54868 RPSAP39-201ENST00000467439 883 ntBASIC7.11□□□□□ -1.27
HMGCS2P54868 AP000648.1-201ENST00000529682 397 ntBASIC7.11□□□□□ -1.27
HMGCS2P54868 CASP5-209ENST00000531367 879 ntTSL 5 BASIC7.11□□□□□ -1.27
HMGCS2P54868 AC004381.1-201ENST00000565498 351 ntTSL 5 BASIC7.11□□□□□ -1.27
HMGCS2P54868 TMEM159-205ENST00000572599 713 ntAPPRIS P1 TSL 5 BASIC7.11□□□□□ -1.27
HMGCS2P54868 AC233702.7-202ENST00000582941 211 ntBASIC7.11□□□□□ -1.27
HMGCS2P54868 AL031601.1-201ENST00000605702 394 ntBASIC7.11□□□□□ -1.27
HMGCS2P54868 MIR6826-201ENST00000617808 98 ntBASIC7.11□□□□□ -1.27
HMGCS2P54868 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC7.11□□□□□ -1.27
HMGCS2P54868 OR8G3P-202ENST00000641572 1255 ntBASIC7.11□□□□□ -1.27
HMGCS2P54868 ZNF440-201ENST00000304060 4189 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGCS2P54868 AC006213.6-201ENST00000623722 4179 ntBASIC7.11□□□□□ -1.27
HMGCS2P54868 AC010168.2-201ENST00000562691 5428 ntBASIC7.11□□□□□ -1.27
HMGCS2P54868 NIT2-201ENST00000394140 7289 ntAPPRIS P1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGCS2P54868 WDR95P-201ENST00000425638 1542 ntBASIC7.11□□□□□ -1.27
HMGCS2P54868 EIF4A2-205ENST00000440191 1889 ntAPPRIS ALT1 TSL 1 (best) BASIC7.11□□□□□ -1.27
HMGCS2P54868 NLGN1-202ENST00000401917 1827 ntTSL 5 BASIC7.11□□□□□ -1.27
HMGCS2P54868 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HMGCS2P54868 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.1□□□□□ -1.27
HMGCS2P54868 IARS-202ENST00000375643 4656 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGCS2P54868 AC092807.3-203ENST00000467530 2745 ntTSL 2 BASIC7.1□□□□□ -1.27
HMGCS2P54868 FRMD5-211ENST00000618556 5059 ntTSL 5 BASIC7.1□□□□□ -1.27
HMGCS2P54868 AC005831.1-201ENST00000624384 1697 ntBASIC7.1□□□□□ -1.27
HMGCS2P54868 RASSF8-201ENST00000282884 1994 ntAPPRIS P1 TSL 2 BASIC7.1□□□□□ -1.27
HMGCS2P54868 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC7.1□□□□□ -1.27
HMGCS2P54868 EBF1-203ENST00000517373 2277 ntTSL 5 BASIC7.1□□□□□ -1.27
HMGCS2P54868 LCOR-201ENST00000286067 4542 ntBASIC7.1□□□□□ -1.27
HMGCS2P54868 MIR433-201ENST00000384837 93 ntBASIC7.1□□□□□ -1.27
HMGCS2P54868 GTF3AP1-201ENST00000416942 1004 ntBASIC7.1□□□□□ -1.27
HMGCS2P54868 SUMO2P3-201ENST00000438311 288 ntBASIC7.1□□□□□ -1.27
HMGCS2P54868 LINC01831-201ENST00000449772 493 ntTSL 1 (best) BASIC7.1□□□□□ -1.27
HMGCS2P54868 YWHAEP1-201ENST00000453697 763 ntBASIC7.1□□□□□ -1.27
HMGCS2P54868 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC7.1□□□□□ -1.27
HMGCS2P54868 RN7SL269P-201ENST00000467795 305 ntBASIC7.1□□□□□ -1.27
HMGCS2P54868 RPS26P39-201ENST00000469206 341 ntBASIC7.1□□□□□ -1.27
HMGCS2P54868 AC124945.1-201ENST00000485133 188 ntBASIC7.1□□□□□ -1.27
HMGCS2P54868 Metazoa_SRP.158-201ENST00000487171 294 ntBASIC7.1□□□□□ -1.27
HMGCS2P54868 AC091979.1-201ENST00000517595 706 ntTSL 2 BASIC7.1□□□□□ -1.27
HMGCS2P54868 AC027308.1-201ENST00000517993 110 ntBASIC7.1□□□□□ -1.27
HMGCS2P54868 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC7.1□□□□□ -1.27
HMGCS2P54868 PCNAP4-201ENST00000532690 730 ntBASIC7.1□□□□□ -1.27
HMGCS2P54868 FAM174B-202ENST00000553393 495 ntTSL 2 BASIC7.1□□□□□ -1.27
HMGCS2P54868 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.1□□□□□ -1.27
HMGCS2P54868 AC026992.2-201ENST00000570122 766 ntTSL 5 BASIC7.1□□□□□ -1.27
HMGCS2P54868 CGA-206ENST00000630630 832 ntTSL 2 BASIC7.1□□□□□ -1.27
HMGCS2P54868 FBXW2-205ENST00000608872 9138 ntAPPRIS P1 TSL 1 (best) BASIC7.1□□□□□ -1.27
HMGCS2P54868 EIF4ENIF1-205ENST00000397523 3420 ntTSL 5 BASIC7.1□□□□□ -1.27
HMGCS2P54868 MLLT10-217ENST00000631589 4955 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
HMGCS2P54868 AP002364.1-201ENST00000623330 3386 ntBASIC7.1□□□□□ -1.27
HMGCS2P54868 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC7.1□□□□□ -1.27
HMGCS2P54868 MDM4-215ENST00000614459 9782 ntTSL 5 BASIC7.1□□□□□ -1.27
HMGCS2P54868 BNC2-203ENST00000380672 12844 ntAPPRIS P2 TSL 2 BASIC7.1□□□□□ -1.27
HMGCS2P54868 CDH13-201ENST00000268613 2722 ntAPPRIS P4 TSL 2 BASIC7.1□□□□□ -1.27
HMGCS2P54868 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.1□□□□□ -1.27
HMGCS2P54868 RBPJP7-201ENST00000442803 1447 ntBASIC7.1□□□□□ -1.27
HMGCS2P54868 RBPJP5-201ENST00000449433 1447 ntBASIC7.1□□□□□ -1.27
HMGCS2P54868 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC7.1□□□□□ -1.27
HMGCS2P54868 AC023154.1-201ENST00000510351 2517 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HMGCS2P54868 NIN-217ENST00000530997 8368 ntAPPRIS P5 TSL 5 BASIC7.09□□□□□ -1.27
HMGCS2P54868 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC7.09□□□□□ -1.27
HMGCS2P54868 MUSK-206ENST00000416899 3344 ntTSL 5 BASIC7.09□□□□□ -1.27
HMGCS2P54868 AC020978.8-201ENST00000571975 3022 ntBASIC7.09□□□□□ -1.27
HMGCS2P54868 AC027088.4-201ENST00000611559 1947 ntBASIC7.09□□□□□ -1.27
HMGCS2P54868 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HMGCS2P54868 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC7.09□□□□□ -1.27
HMGCS2P54868 B3GALT5-203ENST00000380620 13170 ntAPPRIS P1 TSL 1 (best) BASIC7.09□□□□□ -1.27
HMGCS2P54868 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC7.09□□□□□ -1.27
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms