Protein–RNA interactions for Protein: P52655

GTF2A1, Transcription initiation factor IIA subunit 1, humanhuman

Predicted RBP Predictions only

Length 376 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1P52655 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.98□□□□□ -1.45
GTF2A1P52655 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC5.98□□□□□ -1.45
GTF2A1P52655 ZNF782-208ENST00000535338 3296 ntAPPRIS P1 TSL 3 BASIC5.98□□□□□ -1.45
GTF2A1P52655 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC5.98□□□□□ -1.45
GTF2A1P52655 PRLR-201ENST00000231423 1679 ntTSL 1 (best) BASIC5.98□□□□□ -1.45
GTF2A1P52655 ZFY-207ENST00000625061 2273 ntTSL 2 BASIC5.97□□□□□ -1.45
GTF2A1P52655 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.97□□□□□ -1.45
GTF2A1P52655 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC5.97□□□□□ -1.45
GTF2A1P52655 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GTF2A1P52655 RPGRIP1L-201ENST00000262135 8195 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
GTF2A1P52655 SPATA45-201ENST00000332912 506 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
GTF2A1P52655 RNU4-81P-201ENST00000363561 144 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 SNORA70.5-201ENST00000365519 135 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 AC090114.1-201ENST00000393266 448 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 VDAC1P10-201ENST00000416715 891 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC5.97□□□□□ -1.45
GTF2A1P52655 AL162724.2-201ENST00000426157 308 ntTSL 2 BASIC5.97□□□□□ -1.45
GTF2A1P52655 GYG1P2-201ENST00000426437 1006 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC5.97□□□□□ -1.45
GTF2A1P52655 AC018804.1-201ENST00000430381 618 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 SPATA13-AS1-201ENST00000430733 433 ntTSL 3 BASIC5.97□□□□□ -1.45
GTF2A1P52655 GTF2A1-202ENST00000434192 1199 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
GTF2A1P52655 AC092967.1-201ENST00000449016 481 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 RPL7P17-201ENST00000470927 724 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 AL591122.1-201ENST00000487348 492 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
GTF2A1P52655 TOMM22P4-201ENST00000511318 336 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 OR5M4P-201ENST00000529436 925 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 OR5M6P-201ENST00000530227 937 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 AL049844.1-201ENST00000545614 762 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
GTF2A1P52655 LYZ-202ENST00000548839 558 ntTSL 2 BASIC5.97□□□□□ -1.45
GTF2A1P52655 AC090971.3-201ENST00000557871 1041 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 AC124283.2-201ENST00000575085 318 ntTSL 3 BASIC5.97□□□□□ -1.45
GTF2A1P52655 AC087499.3-201ENST00000578210 717 ntTSL 2 BASIC5.97□□□□□ -1.45
GTF2A1P52655 PPIAL4F-202ENST00000581138 660 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
GTF2A1P52655 PPIAL4E-201ENST00000581164 785 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
GTF2A1P52655 ZNF85-206ENST00000596476 1259 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
GTF2A1P52655 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 LINC00251-201ENST00000627569 1055 ntTSL 3 BASIC5.97□□□□□ -1.45
GTF2A1P52655 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC5.97□□□□□ -1.45
GTF2A1P52655 TOX3-202ENST00000407228 3124 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
GTF2A1P52655 NBPF10-202ENST00000617010 11630 ntTSL 5 BASIC5.97□□□□□ -1.45
GTF2A1P52655 AL356479.1-203ENST00000411798 1440 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
GTF2A1P52655 AL158152.1-201ENST00000602652 1435 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 RBPJP2-201ENST00000618187 1444 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 ZNF727-201ENST00000456806 1679 ntAPPRIS P1 TSL 4 BASIC5.97□□□□□ -1.45
GTF2A1P52655 AL451064.2-201ENST00000623514 1654 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 CLUL1-213ENST00000620089 1947 ntTSL 5 BASIC5.97□□□□□ -1.45
GTF2A1P52655 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC5.97□□□□□ -1.45
GTF2A1P52655 CCNT2P1-201ENST00000423082 1315 ntBASIC5.97□□□□□ -1.45
GTF2A1P52655 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
GTF2A1P52655 PHF11-201ENST00000357596 1471 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
GTF2A1P52655 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
GTF2A1P52655 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC5.96□□□□□ -1.46
GTF2A1P52655 ADAM5-202ENST00000399789 1942 ntBASIC5.96□□□□□ -1.46
GTF2A1P52655 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC5.96□□□□□ -1.46
GTF2A1P52655 RNA5SP478-201ENST00000364657 115 ntBASIC5.96□□□□□ -1.46
GTF2A1P52655 OR1N2-201ENST00000373688 1103 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
GTF2A1P52655 AL359715.1-201ENST00000404330 555 ntBASIC5.96□□□□□ -1.46
GTF2A1P52655 AL645936.2-201ENST00000430565 928 ntBASIC5.96□□□□□ -1.46
GTF2A1P52655 AL021707.2-201ENST00000431924 786 ntTSL 3 BASIC5.96□□□□□ -1.46
GTF2A1P52655 LINC02243-201ENST00000441841 961 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GTF2A1P52655 RPS4XP17-201ENST00000479057 754 ntBASIC5.96□□□□□ -1.46
GTF2A1P52655 RN7SL282P-201ENST00000479676 297 ntBASIC5.96□□□□□ -1.46
GTF2A1P52655 AC106895.1-202ENST00000502956 777 ntTSL 3 BASIC5.96□□□□□ -1.46
GTF2A1P52655 AC110760.2-202ENST00000507517 946 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GTF2A1P52655 AC114947.1-201ENST00000511991 432 ntTSL 2 BASIC5.96□□□□□ -1.46
GTF2A1P52655 AC087273.2-201ENST00000519038 634 ntTSL 3 BASIC5.96□□□□□ -1.46
GTF2A1P52655 AC022973.3-201ENST00000521014 467 ntTSL 5 BASIC5.96□□□□□ -1.46
GTF2A1P52655 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.96□□□□□ -1.46
GTF2A1P52655 AC022639.1-202ENST00000524360 581 ntTSL 4 BASIC5.96□□□□□ -1.46
GTF2A1P52655 AC084824.2-201ENST00000548906 345 ntBASIC5.96□□□□□ -1.46
GTF2A1P52655 AC084033.2-201ENST00000551532 967 ntBASIC5.96□□□□□ -1.46
GTF2A1P52655 OR4C49P-201ENST00000563891 900 ntBASIC5.96□□□□□ -1.46
GTF2A1P52655 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC5.96□□□□□ -1.46
GTF2A1P52655 AC009303.2-206ENST00000588042 786 ntTSL 5 BASIC5.96□□□□□ -1.46
GTF2A1P52655 LINC01837-204ENST00000593211 570 ntTSL 4 BASIC5.96□□□□□ -1.46
GTF2A1P52655 AC007255.2-201ENST00000604053 631 ntBASIC5.96□□□□□ -1.46
GTF2A1P52655 AC004908.1-201ENST00000606572 541 ntBASIC5.96□□□□□ -1.46
GTF2A1P52655 AC068631.1-255ENST00000608173 588 ntTSL 5 BASIC5.96□□□□□ -1.46
GTF2A1P52655 OR7E91P-202ENST00000642062 1198 ntBASIC5.96□□□□□ -1.46
GTF2A1P52655 PCDH9-203ENST00000456367 5072 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GTF2A1P52655 UQCRC2-202ENST00000561553 1415 ntTSL 5 BASIC5.96□□□□□ -1.46
GTF2A1P52655 HYKK-205ENST00000566332 1422 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GTF2A1P52655 AL731532.2-201ENST00000623542 1953 ntBASIC5.96□□□□□ -1.46
GTF2A1P52655 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
GTF2A1P52655 TSPAN6-204ENST00000612152 3796 ntTSL 5 BASIC5.96□□□□□ -1.46
GTF2A1P52655 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC5.96□□□□□ -1.46
GTF2A1P52655 ABCC13-202ENST00000463099 3842 ntBASIC5.96□□□□□ -1.46
GTF2A1P52655 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.46
GTF2A1P52655 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
GTF2A1P52655 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GTF2A1P52655 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
GTF2A1P52655 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC5.95□□□□□ -1.46
GTF2A1P52655 LRP12-201ENST00000276654 4112 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
GTF2A1P52655 AC090774.4-201ENST00000578888 1372 ntBASIC5.95□□□□□ -1.46
GTF2A1P52655 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
GTF2A1P52655 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
GTF2A1P52655 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 158.9 ms