Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 AC008770.1-206ENST00000589551 523 ntTSL 3 BASIC8.68□□□□□ -1.02
COL9A1P20849 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC8.68□□□□□ -1.02
COL9A1P20849 MIR7162-201ENST00000611134 69 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 AC091905.1-201ENST00000624400 311 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 LINC00976-201ENST00000625513 783 ntTSL 3 BASIC8.68□□□□□ -1.02
COL9A1P20849 PISRT1-201ENST00000626175 531 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC8.68□□□□□ -1.02
COL9A1P20849 AC110994.2-201ENST00000635481 492 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 DNALI1-201ENST00000296218 2649 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 AC117409.1-201ENST00000470499 1310 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC8.68□□□□□ -1.02
COL9A1P20849 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 BTBD7-202ENST00000334746 8430 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 SBNO1-203ENST00000602398 4313 ntAPPRIS ALT1 TSL 5 BASIC8.68□□□□□ -1.02
COL9A1P20849 OTUD7B-202ENST00000581312 8872 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 AC024337.1-201ENST00000558860 1562 ntTSL 4 BASIC8.68□□□□□ -1.02
COL9A1P20849 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 PTGS1-203ENST00000373698 4987 ntTSL 2 BASIC8.68□□□□□ -1.02
COL9A1P20849 NCKAP1L-202ENST00000545638 3612 ntTSL 2 BASIC8.68□□□□□ -1.02
COL9A1P20849 AC019155.2-201ENST00000420224 1918 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 DNTT-202ENST00000630152 1954 ntAPPRIS ALT1 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 AC098864.1-202ENST00000507869 2129 ntTSL 2 BASIC8.68□□□□□ -1.02
COL9A1P20849 LINC02239-201ENST00000504339 2290 ntTSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 GJB2-201ENST00000382844 2309 ntAPPRIS P1 BASIC8.68□□□□□ -1.02
COL9A1P20849 TANGO6-201ENST00000261778 4816 ntAPPRIS P1 TSL 1 (best) BASIC8.68□□□□□ -1.02
COL9A1P20849 ACSM5P1-201ENST00000566754 2438 ntBASIC8.68□□□□□ -1.02
COL9A1P20849 AJUBA-203ENST00000397388 2648 ntTSL 2 BASIC8.67□□□□□ -1.02
COL9A1P20849 AL353795.3-201ENST00000624351 5702 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 SEMA4D-207ENST00000420987 4275 ntTSL 5 BASIC8.67□□□□□ -1.02
COL9A1P20849 LRRC37A4P-202ENST00000581296 5372 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 SORBS1-201ENST00000277982 3517 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL9A1P20849 LRGUK-201ENST00000285928 3163 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL9A1P20849 CLDN1-201ENST00000295522 3481 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL9A1P20849 RPL7A-201ENST00000315731 680 ntTSL 2 BASIC8.67□□□□□ -1.02
COL9A1P20849 PRR32-201ENST00000371125 1228 ntAPPRIS P1 TSL 2 BASIC8.67□□□□□ -1.02
COL9A1P20849 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
COL9A1P20849 MRPL32P1-201ENST00000406301 247 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 AL137784.1-201ENST00000407121 745 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 OR2A25-201ENST00000408898 1014 ntAPPRIS P1 BASIC8.67□□□□□ -1.02
COL9A1P20849 OR2L6P-201ENST00000416377 940 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 RBMY2FP-202ENST00000420346 1263 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 MTCYBP8-201ENST00000422855 651 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 Z82205.1-201ENST00000428456 297 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 RPL7P56-201ENST00000429441 717 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 AL596220.1-202ENST00000429768 314 ntTSL 3 BASIC8.67□□□□□ -1.02
COL9A1P20849 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC8.67□□□□□ -1.02
COL9A1P20849 WBP1LP7-201ENST00000437905 363 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 RPL7P54-201ENST00000438336 674 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 SMIM12-204ENST00000446026 2817 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL9A1P20849 AC009948.1-205ENST00000453026 2007 ntTSL 3 BASIC8.67□□□□□ -1.02
COL9A1P20849 DISC1-IT1-201ENST00000456782 762 ntTSL 3 BASIC8.67□□□□□ -1.02
COL9A1P20849 AC044810.1-201ENST00000480271 711 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 RN7SL37P-201ENST00000490461 307 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.67□□□□□ -1.02
COL9A1P20849 AC106774.2-201ENST00000510266 406 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 KCTD9P2-201ENST00000512203 1013 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 LARP1B-210ENST00000512292 3105 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
COL9A1P20849 AC117383.2-201ENST00000514722 322 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 SNORA81.2-201ENST00000516868 170 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 AC027541.1-201ENST00000519306 485 ntTSL 3 BASIC8.67□□□□□ -1.02
COL9A1P20849 RRM2B-206ENST00000519317 420 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
COL9A1P20849 LINCR-0001-203ENST00000524047 545 ntTSL 4 BASIC8.67□□□□□ -1.02
COL9A1P20849 PHBP17-201ENST00000528576 541 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 RERG-AS1-201ENST00000541243 337 ntTSL 2 BASIC8.67□□□□□ -1.02
COL9A1P20849 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC8.67□□□□□ -1.02
COL9A1P20849 AL132780.1-202ENST00000548322 591 ntTSL 4 BASIC8.67□□□□□ -1.02
COL9A1P20849 AL110292.1-202ENST00000552303 568 ntTSL 4 BASIC8.67□□□□□ -1.02
COL9A1P20849 AL845331.3-202ENST00000562856 261 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 PWRN1-205ENST00000565295 465 ntTSL 3 BASIC8.67□□□□□ -1.02
COL9A1P20849 RBM22P12-201ENST00000567098 1255 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 AC027279.1-201ENST00000568885 4284 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 AC008109.1-201ENST00000583163 826 ntTSL 2 BASIC8.67□□□□□ -1.02
COL9A1P20849 LINC01905-202ENST00000588139 459 ntTSL 3 BASIC8.67□□□□□ -1.02
COL9A1P20849 LAMTOR5-AS1-207ENST00000590826 574 ntTSL 4 BASIC8.67□□□□□ -1.02
COL9A1P20849 OR7A18P-201ENST00000600416 277 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 AL391646.1-201ENST00000603860 190 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 AC112187.2-201ENST00000604345 283 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC8.67□□□□□ -1.02
COL9A1P20849 CAB39-207ENST00000614925 1619 ntTSL 5 BASIC8.67□□□□□ -1.02
COL9A1P20849 Metazoa_SRP.115-201ENST00000619303 284 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 Metazoa_SRP.99-201ENST00000621370 254 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
COL9A1P20849 AC129778.1-202ENST00000623812 261 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 AL591379.1-207ENST00000635982 261 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 AMYH02020865.1-205ENST00000636189 261 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 AL590396.3-201ENST00000636334 300 ntBASIC8.67□□□□□ -1.02
COL9A1P20849 PDE6A-201ENST00000255266 5642 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL9A1P20849 GID8-201ENST00000266069 4397 ntAPPRIS P1 TSL 1 (best) BASIC8.67□□□□□ -1.02
COL9A1P20849 EYA1-201ENST00000303824 3930 ntAPPRIS ALT1 TSL 2 BASIC8.67□□□□□ -1.02
COL9A1P20849 C1orf198-202ENST00000427697 3666 ntAPPRIS ALT2 TSL 2 BASIC8.67□□□□□ -1.02
COL9A1P20849 COL4A6-208ENST00000538570 6528 ntTSL 1 (best) BASIC8.67□□□□□ -1.02
COL9A1P20849 EGFLAM-202ENST00000336740 3071 ntTSL 2 BASIC8.67□□□□□ -1.02
COL9A1P20849 ZNF714-201ENST00000425625 2562 ntTSL 5 BASIC8.67□□□□□ -1.02
COL9A1P20849 HIST1H3G-201ENST00000614378 2411 ntAPPRIS P1 BASIC8.66□□□□□ -1.02
COL9A1P20849 GRB10-204ENST00000398812 4705 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL9A1P20849 FGF5-201ENST00000312465 4555 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL9A1P20849 KIAA0391-205ENST00000603544 2232 ntTSL 5 BASIC8.66□□□□□ -1.02
COL9A1P20849 LIG4-202ENST00000405925 4065 ntAPPRIS P1 TSL 1 (best) BASIC8.66□□□□□ -1.02
COL9A1P20849 CCDC83-202ENST00000342404 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC8.66□□□□□ -1.02
Retrieved 100 of 98,524 protein–RNA pairs in 158.1 ms