Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 MYOF-202ENST00000359263 6719 ntAPPRIS P1 TSL 1 (best) BASIC7.67□□□□□ -1.18
NFKB1P19838 AL353898.3-201ENST00000624679 1755 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 RBM11-201ENST00000400577 1934 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NFKB1P19838 BMS1-201ENST00000374518 7753 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NFKB1P19838 OR2A20P-201ENST00000479887 2913 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 TMEM135-202ENST00000340353 3938 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NFKB1P19838 NEDD9-208ENST00000504387 3211 ntAPPRIS ALT2 TSL 2 BASIC7.66□□□□□ -1.18
NFKB1P19838 DAZ3-201ENST00000315357 3277 ntAPPRIS ALT2 TSL 1 (best) BASIC7.66□□□□□ -1.18
NFKB1P19838 DAZ2-201ENST00000382294 3277 ntAPPRIS ALT2 TSL 5 BASIC7.66□□□□□ -1.18
NFKB1P19838 DAZ4-204ENST00000415508 3277 ntTSL 5 BASIC7.66□□□□□ -1.18
NFKB1P19838 NCOA4-205ENST00000583565 2371 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
NFKB1P19838 CU633906.1-201ENST00000621924 2380 ntTSL 3 BASIC7.66□□□□□ -1.18
NFKB1P19838 OPALIN-204ENST00000419479 3581 ntTSL 2 BASIC7.66□□□□□ -1.18
NFKB1P19838 ALKBH8-202ENST00000389568 2491 ntAPPRIS P3 TSL 5 BASIC7.66□□□□□ -1.18
NFKB1P19838 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NFKB1P19838 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC7.66□□□□□ -1.18
NFKB1P19838 OR56B2P-201ENST00000317102 954 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 Y_RNA.813-201ENST00000364639 102 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 RNA5SP79-201ENST00000365193 109 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 RGS8-203ENST00000367557 859 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NFKB1P19838 PCOTH-201ENST00000382133 805 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NFKB1P19838 MIR575-201ENST00000385013 94 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 KCNAB1-202ENST00000389634 1119 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NFKB1P19838 RN7SKP89-201ENST00000410774 242 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 RPL34P19-201ENST00000415903 342 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 EEF1A1P34-201ENST00000419888 1267 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC7.66□□□□□ -1.18
NFKB1P19838 KLF7-IT1-201ENST00000428777 655 ntTSL 2 BASIC7.66□□□□□ -1.18
NFKB1P19838 AC002378.1-201ENST00000432360 298 ntTSL 3 BASIC7.66□□□□□ -1.18
NFKB1P19838 PIP5K1P2-201ENST00000437005 1120 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 AC005040.1-201ENST00000437783 482 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 TULP3P1-201ENST00000442322 816 ntTSL 3 BASIC7.66□□□□□ -1.18
NFKB1P19838 AC139712.3-201ENST00000443926 639 ntTSL 2 BASIC7.66□□□□□ -1.18
NFKB1P19838 AC114488.2-222ENST00000445166 362 ntTSL 3 BASIC7.66□□□□□ -1.18
NFKB1P19838 RHEBP1-201ENST00000448647 556 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 RPS29P5-201ENST00000452777 171 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 TPT1P7-201ENST00000458300 517 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 RN7SL233P-201ENST00000469988 277 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 AC114781.4-201ENST00000513707 639 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 AC106038.2-201ENST00000520706 568 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.66□□□□□ -1.18
NFKB1P19838 OR4A43P-201ENST00000532938 908 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC7.66□□□□□ -1.18
NFKB1P19838 FXYD5-207ENST00000541435 898 ntAPPRIS P2 TSL 2 BASIC7.66□□□□□ -1.18
NFKB1P19838 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.66□□□□□ -1.18
NFKB1P19838 AC009269.4-201ENST00000557828 440 ntTSL 3 BASIC7.66□□□□□ -1.18
NFKB1P19838 AC138749.2-201ENST00000566048 167 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 AC007136.1-201ENST00000589141 199 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 AC112230.1-201ENST00000604342 547 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 CR382285.1-202ENST00000604687 547 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 RN7SL760P-201ENST00000607344 270 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 KRBOX1-202ENST00000418176 2566 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NFKB1P19838 MGAM-208ENST00000549489 6525 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NFKB1P19838 MRE11-201ENST00000323929 6897 ntAPPRIS P3 TSL 1 (best) BASIC7.66□□□□□ -1.18
NFKB1P19838 ZNF121-201ENST00000320451 1563 ntAPPRIS P1 TSL 3 BASIC7.66□□□□□ -1.18
NFKB1P19838 OR4C1P-202ENST00000641065 1569 ntBASIC7.66□□□□□ -1.18
NFKB1P19838 A2M-201ENST00000318602 4844 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NFKB1P19838 AL133464.1-201ENST00000635130 1705 ntTSL 5 BASIC7.66□□□□□ -1.18
NFKB1P19838 OSGIN2-201ENST00000297438 4209 ntTSL 1 (best) BASIC7.66□□□□□ -1.18
NFKB1P19838 UGT2B4-201ENST00000305107 2103 ntAPPRIS P1 TSL 1 (best) BASIC7.66□□□□□ -1.18
NFKB1P19838 DIO2-210ENST00000557010 6367 ntAPPRIS P1 TSL 2 BASIC7.66□□□□□ -1.18
NFKB1P19838 CDH17-202ENST00000441892 2204 ntTSL 2 BASIC7.66□□□□□ -1.18
NFKB1P19838 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.66□□□□□ -1.18
NFKB1P19838 ZNF271P-201ENST00000399070 5124 ntTSL 2 BASIC7.65□□□□□ -1.18
NFKB1P19838 ZNF397-202ENST00000330501 5251 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NFKB1P19838 UTY-213ENST00000612274 6586 ntAPPRIS ALT2 TSL 1 (best) BASIC7.65□□□□□ -1.18
NFKB1P19838 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NFKB1P19838 CCL13-201ENST00000225844 851 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NFKB1P19838 GZMA-201ENST00000274306 894 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NFKB1P19838 IFT22-201ENST00000315322 1130 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NFKB1P19838 TIGD2-201ENST00000317005 2083 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
NFKB1P19838 AKAP5-201ENST00000320636 2601 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
NFKB1P19838 ZNF20-201ENST00000334213 3061 ntAPPRIS P1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NFKB1P19838 COX7B2-201ENST00000355591 542 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
NFKB1P19838 RNU4-21P-201ENST00000362802 126 ntBASIC7.65□□□□□ -1.18
NFKB1P19838 Y_RNA.192-201ENST00000363977 102 ntBASIC7.65□□□□□ -1.18
NFKB1P19838 FAM204BP-201ENST00000369171 701 ntBASIC7.65□□□□□ -1.18
NFKB1P19838 RNU6-1200P-201ENST00000384162 107 ntBASIC7.65□□□□□ -1.18
NFKB1P19838 RNA5SP297-201ENST00000391029 113 ntBASIC7.65□□□□□ -1.18
NFKB1P19838 COX7B2-202ENST00000396533 617 ntAPPRIS P2 TSL 1 (best) BASIC7.65□□□□□ -1.18
NFKB1P19838 RNU2-66P-201ENST00000410650 161 ntBASIC7.65□□□□□ -1.18
NFKB1P19838 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC7.65□□□□□ -1.18
NFKB1P19838 GAPDHP51-201ENST00000426454 1000 ntBASIC7.65□□□□□ -1.18
NFKB1P19838 AC005189.1-201ENST00000431286 310 ntBASIC7.65□□□□□ -1.18
NFKB1P19838 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC7.65□□□□□ -1.18
NFKB1P19838 LINC01852-201ENST00000434223 967 ntTSL 1 (best) BASIC7.65□□□□□ -1.18
NFKB1P19838 UBE2V1P8-201ENST00000437166 265 ntBASIC7.65□□□□□ -1.18
NFKB1P19838 AC091862.1-201ENST00000438016 1100 ntBASIC7.65□□□□□ -1.18
NFKB1P19838 CLDN34-201ENST00000445307 995 ntAPPRIS P1 BASIC7.65□□□□□ -1.18
NFKB1P19838 AL357793.2-201ENST00000447056 850 ntTSL 3 BASIC7.65□□□□□ -1.18
NFKB1P19838 MTCO1P48-201ENST00000448024 1096 ntBASIC7.65□□□□□ -1.18
NFKB1P19838 RAB28P3-201ENST00000448325 597 ntBASIC7.65□□□□□ -1.18
NFKB1P19838 EPS15P1-201ENST00000448836 336 ntBASIC7.65□□□□□ -1.18
NFKB1P19838 AP000431.2-201ENST00000450653 790 ntTSL 2 BASIC7.65□□□□□ -1.18
NFKB1P19838 SNRPG-206ENST00000454893 527 ntTSL 3 BASIC7.65□□□□□ -1.18
NFKB1P19838 AL139805.2-201ENST00000455305 2433 ntBASIC7.65□□□□□ -1.18
NFKB1P19838 AL021396.1-202ENST00000457707 1929 ntTSL 2 BASIC7.65□□□□□ -1.18
NFKB1P19838 PFN2-209ENST00000481275 560 ntTSL 4 BASIC7.65□□□□□ -1.18
NFKB1P19838 MEIS1-209ENST00000488550 5111 ntAPPRIS ALT1 TSL 1 (best) BASIC7.65□□□□□ -1.18
NFKB1P19838 TFDP2-222ENST00000495310 1442 ntAPPRIS ALT2 TSL 2 BASIC7.65□□□□□ -1.18
Retrieved 100 of 98,524 protein–RNA pairs in 109 ms