Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 PRKDC-201ENST00000314191 13509 ntAPPRIS P4 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFRAP16234 ZNF337-202ENST00000376436 3613 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFRAP16234 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFRAP16234 RNU11-6P-201ENST00000391127 133 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFRAP16234 AL157702.1-201ENST00000398764 426 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 AL445238.1-204ENST00000400311 463 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 RNU2-18P-201ENST00000411224 162 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 AC116036.1-201ENST00000412199 367 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 MTND2P12-201ENST00000417560 1252 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 SETP9-201ENST00000423837 832 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFRAP16234 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.58□□□□□ -1.36
PDGFRAP16234 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFRAP16234 POU5F1P5-201ENST00000445059 658 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 VN1R96P-201ENST00000446052 858 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PDGFRAP16234 AC019084.1-201ENST00000457337 432 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 RN7SL552P-201ENST00000462094 276 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 AC104339.1-201ENST00000465478 348 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC6.58□□□□□ -1.36
PDGFRAP16234 AC112484.3-201ENST00000505910 329 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 RNA5SP206-201ENST00000516703 121 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 MIR3154-201ENST00000577829 84 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 MIR3189-201ENST00000578735 73 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC6.58□□□□□ -1.36
PDGFRAP16234 AL354950.1-201ENST00000614150 568 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 MIR6811-201ENST00000620409 58 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.58□□□□□ -1.36
PDGFRAP16234 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.58□□□□□ -1.36
PDGFRAP16234 AC132825.8-201ENST00000640783 297 ntBASIC6.58□□□□□ -1.36
PDGFRAP16234 DOCK9-208ENST00000448493 7887 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
PDGFRAP16234 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.58□□□□□ -1.36
PDGFRAP16234 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC6.58□□□□□ -1.36
PDGFRAP16234 ICE2-201ENST00000261520 7209 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFRAP16234 GPR18-201ENST00000340807 1698 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFRAP16234 KIAA2012-204ENST00000498697 3772 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
PDGFRAP16234 OSBPL9-206ENST00000453295 2842 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PDGFRAP16234 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
PDGFRAP16234 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFRAP16234 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFRAP16234 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFRAP16234 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFRAP16234 OSBPL6-207ENST00000409631 3273 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFRAP16234 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
PDGFRAP16234 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFRAP16234 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFRAP16234 AL442071.1-201ENST00000289890 558 ntTSL 3 BASIC6.57□□□□□ -1.36
PDGFRAP16234 OR4K5-201ENST00000315915 1078 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PDGFRAP16234 OR11H13P-201ENST00000359695 979 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 RNA5SP279-201ENST00000365513 117 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 RPL24P2-201ENST00000421023 475 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 RPS7P14-201ENST00000426405 583 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 AC112492.2-201ENST00000432774 1030 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 AC211433.1-202ENST00000434256 1187 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFRAP16234 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.57□□□□□ -1.36
PDGFRAP16234 SOCS5P1-201ENST00000440415 949 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFRAP16234 RANP2-201ENST00000456833 229 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 RN7SL326P-201ENST00000477493 296 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC6.57□□□□□ -1.36
PDGFRAP16234 KHDC1P1-201ENST00000511053 508 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 RNA5SP441-201ENST00000516809 88 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 RNA5SP400-201ENST00000517155 111 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC6.57□□□□□ -1.36
PDGFRAP16234 AC024405.1-201ENST00000532521 1042 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFRAP16234 AC092652.2-201ENST00000552220 622 ntTSL 4 BASIC6.57□□□□□ -1.36
PDGFRAP16234 AC023310.2-201ENST00000553844 547 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.57□□□□□ -1.36
PDGFRAP16234 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC6.57□□□□□ -1.36
PDGFRAP16234 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.57□□□□□ -1.36
PDGFRAP16234 AC015849.6-201ENST00000605454 474 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 AL021368.3-201ENST00000607119 578 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 AP003789.1-201ENST00000617737 605 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 MIR6806-201ENST00000622141 64 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 AL353684.1-201ENST00000622677 1120 ntBASIC6.57□□□□□ -1.36
PDGFRAP16234 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFRAP16234 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFRAP16234 ODF2-205ENST00000393527 3653 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFRAP16234 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC6.57□□□□□ -1.36
PDGFRAP16234 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC6.57□□□□□ -1.36
PDGFRAP16234 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.57□□□□□ -1.36
PDGFRAP16234 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFRAP16234 C16orf87-202ENST00000394806 6640 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PDGFRAP16234 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.57□□□□□ -1.36
PDGFRAP16234 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFRAP16234 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFRAP16234 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC6.56□□□□□ -1.36
PDGFRAP16234 AOX3P-204ENST00000491025 2107 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 AP001541.1-201ENST00000623322 1904 ntBASIC6.56□□□□□ -1.36
PDGFRAP16234 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.56□□□□□ -1.36
PDGFRAP16234 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFRAP16234 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
PDGFRAP16234 ESRRG-208ENST00000391890 5542 ntAPPRIS P1 TSL 5 BASIC6.56□□□□□ -1.36
PDGFRAP16234 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFRAP16234 DPH5-201ENST00000342173 1143 ntAPPRIS ALT1 TSL 1 (best) BASIC6.56□□□□□ -1.36
PDGFRAP16234 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC6.56□□□□□ -1.36
PDGFRAP16234 SNORA70H-201ENST00000383910 135 ntBASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 94.8 ms