Protein–RNA interactions for Protein: P12107

COL11A1, Collagen alpha-1(XI) chain, humanhuman

Predicted RBP Predictions only

Length 1,806 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1P12107 DNAJC19P5-201ENST00000443295 316 ntBASIC6.87□□□□□ -1.31
COL11A1P12107 AC112187.1-201ENST00000455837 479 ntBASIC6.87□□□□□ -1.31
COL11A1P12107 AL122020.1-201ENST00000472287 459 ntBASIC6.87□□□□□ -1.31
COL11A1P12107 RN7SL629P-201ENST00000489622 285 ntBASIC6.87□□□□□ -1.31
COL11A1P12107 PDE4D-225ENST00000515835 590 ntTSL 4 BASIC6.87□□□□□ -1.31
COL11A1P12107 TXNP4-201ENST00000575018 310 ntBASIC6.87□□□□□ -1.31
COL11A1P12107 AC010463.2-201ENST00000597592 661 ntTSL 5 BASIC6.87□□□□□ -1.31
COL11A1P12107 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.87□□□□□ -1.31
COL11A1P12107 FNDC7-201ENST00000370017 3332 ntAPPRIS P1 TSL 5 BASIC6.87□□□□□ -1.31
COL11A1P12107 CLEC2D-203ENST00000290855 5279 ntAPPRIS P3 TSL 1 (best) BASIC6.87□□□□□ -1.31
COL11A1P12107 AC110716.2-201ENST00000563865 3945 ntBASIC6.87□□□□□ -1.31
COL11A1P12107 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
COL11A1P12107 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC6.86□□□□□ -1.31
COL11A1P12107 AHI1-204ENST00000367800 5921 ntAPPRIS P2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 GPM6A-201ENST00000280187 2854 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 CALCOCO2-204ENST00000448105 1916 ntTSL 2 BASIC6.86□□□□□ -1.31
COL11A1P12107 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 ZNF195-201ENST00000005082 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 AP003119.3-201ENST00000566747 4192 ntBASIC6.86□□□□□ -1.31
COL11A1P12107 PLD5-203ENST00000427495 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 TMEM132B-206ENST00000613307 9659 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 ANKRD36BP2-207ENST00000622311 5398 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 MIR375-201ENST00000362103 64 ntBASIC6.86□□□□□ -1.31
COL11A1P12107 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
COL11A1P12107 AL445928.1-201ENST00000435545 222 ntBASIC6.86□□□□□ -1.31
COL11A1P12107 AC017074.2-201ENST00000439382 607 ntTSL 2 BASIC6.86□□□□□ -1.31
COL11A1P12107 CUBNP2-201ENST00000443534 1139 ntBASIC6.86□□□□□ -1.31
COL11A1P12107 GAS5-218ENST00000448718 565 ntTSL 2 BASIC6.86□□□□□ -1.31
COL11A1P12107 RN7SL515P-201ENST00000463999 297 ntBASIC6.86□□□□□ -1.31
COL11A1P12107 AP001893.1-201ENST00000532866 362 ntTSL 5 BASIC6.86□□□□□ -1.31
COL11A1P12107 GPRC5D-AS1-208ENST00000545914 566 ntTSL 3 BASIC6.86□□□□□ -1.31
COL11A1P12107 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC6.86□□□□□ -1.31
COL11A1P12107 AC009121.2-202ENST00000572706 505 ntTSL 3 BASIC6.86□□□□□ -1.31
COL11A1P12107 AC104695.2-201ENST00000605056 775 ntBASIC6.86□□□□□ -1.31
COL11A1P12107 VTI1A-201ENST00000393077 4131 ntAPPRIS P1 TSL 2 BASIC6.86□□□□□ -1.31
COL11A1P12107 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.86□□□□□ -1.31
COL11A1P12107 CYP27C1-201ENST00000335247 4401 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.86□□□□□ -1.31
COL11A1P12107 UTY-205ENST00000382896 6661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 UTY-211ENST00000540140 6652 ntTSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 UTY-214ENST00000617789 6682 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.86□□□□□ -1.31
COL11A1P12107 ADAM29-202ENST00000404450 3171 ntAPPRIS P1 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 CLASP2-213ENST00000480013 5972 ntTSL 5 BASIC6.86□□□□□ -1.31
COL11A1P12107 ZNF585A-202ENST00000356958 6822 ntTSL 2 BASIC6.86□□□□□ -1.31
COL11A1P12107 CDON-201ENST00000263577 4186 ntAPPRIS P3 TSL 1 (best) BASIC6.86□□□□□ -1.31
COL11A1P12107 TMEM161B-211ENST00000512429 1796 ntTSL 2 BASIC6.86□□□□□ -1.31
COL11A1P12107 CTNND1-202ENST00000361332 6295 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.85□□□□□ -1.31
COL11A1P12107 MTIF2-201ENST00000263629 2528 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC6.85□□□□□ -1.31
COL11A1P12107 ERBB4-202ENST00000342788 12136 ntAPPRIS P3 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 AC016583.1-201ENST00000624221 2431 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COL11A1P12107 RNU6-171P-201ENST00000384354 107 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 RPL34-203ENST00000394668 853 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 HMGB1P20-201ENST00000402555 677 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 RN7SL799P-201ENST00000475891 298 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC6.85□□□□□ -1.31
COL11A1P12107 SSX6-203ENST00000509958 336 ntTSL 3 BASIC6.85□□□□□ -1.31
COL11A1P12107 IGLV3-30-201ENST00000524362 298 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 PCNAP4-201ENST00000532690 730 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC6.85□□□□□ -1.31
COL11A1P12107 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC6.85□□□□□ -1.31
COL11A1P12107 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC6.85□□□□□ -1.31
COL11A1P12107 AC114488.3-201ENST00000581333 480 ntTSL 4 BASIC6.85□□□□□ -1.31
COL11A1P12107 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC6.85□□□□□ -1.31
COL11A1P12107 AC119403.2-201ENST00000590960 598 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.85□□□□□ -1.31
COL11A1P12107 CCL4-202ENST00000615863 904 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 AL049767.1-202ENST00000637826 242 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 AC092821.2-201ENST00000545710 2042 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 PPP1R11-201ENST00000376758 1723 ntTSL 2 BASIC6.85□□□□□ -1.31
COL11A1P12107 HTR4-206ENST00000520086 2272 ntTSL 2 BASIC6.85□□□□□ -1.31
COL11A1P12107 TMEM75-201ENST00000624314 2165 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
COL11A1P12107 ARHGAP32-203ENST00000524655 8194 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 CTNND1-204ENST00000361796 6226 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.85□□□□□ -1.31
COL11A1P12107 RARSP1-201ENST00000542842 1418 ntBASIC6.85□□□□□ -1.31
COL11A1P12107 FOCAD-216ENST00000605086 4195 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 SGK3-201ENST00000345714 4055 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 TMCC1-203ENST00000432054 5631 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.85□□□□□ -1.31
COL11A1P12107 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 AC116366.3-205ENST00000640655 8032 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
COL11A1P12107 KIAA0232-201ENST00000307659 7841 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 IFNE-201ENST00000448696 1475 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
COL11A1P12107 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 ZMYND8-206ENST00000372023 5144 ntAPPRIS ALT2 TSL 5 BASIC6.85□□□□□ -1.31
COL11A1P12107 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC6.85□□□□□ -1.31
COL11A1P12107 ZNF451-204ENST00000370708 9478 ntTSL 2 BASIC6.85□□□□□ -1.31
COL11A1P12107 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC6.85□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 79.9 ms