Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 SETP3-201ENST00000581726 813 ntBASIC6.81□□□□□ -1.32
CHRNA1P02708 AP005230.1-203ENST00000582086 887 ntTSL 2 BASIC6.81□□□□□ -1.32
CHRNA1P02708 AC090236.2-201ENST00000587933 1101 ntBASIC6.81□□□□□ -1.32
CHRNA1P02708 Z98949.1-228ENST00000595093 798 ntTSL 5 BASIC6.81□□□□□ -1.32
CHRNA1P02708 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC6.81□□□□□ -1.32
CHRNA1P02708 MIR6886-201ENST00000619864 61 ntBASIC6.81□□□□□ -1.32
CHRNA1P02708 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC6.81□□□□□ -1.32
CHRNA1P02708 SNORA17.5-201ENST00000630429 132 ntBASIC6.81□□□□□ -1.32
CHRNA1P02708 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.81□□□□□ -1.32
CHRNA1P02708 AC005154.1-228ENST00000454922 1405 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHRNA1P02708 PSD3-218ENST00000523619 8145 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHRNA1P02708 PYHIN1-203ENST00000368140 2083 ntAPPRIS P4 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHRNA1P02708 AC008957.3-201ENST00000624112 2242 ntBASIC6.81□□□□□ -1.32
CHRNA1P02708 AC011416.1-201ENST00000514947 1732 ntBASIC6.81□□□□□ -1.32
CHRNA1P02708 RBM28-201ENST00000223073 15507 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
CHRNA1P02708 AP001157.1-201ENST00000550837 2339 ntBASIC6.81□□□□□ -1.32
CHRNA1P02708 GABRR1-206ENST00000611484 3259 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
CHRNA1P02708 ANKRD46-201ENST00000335659 2649 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHRNA1P02708 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.8□□□□□ -1.32
CHRNA1P02708 PCDH11Y-204ENST00000400457 9039 ntAPPRIS P5 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHRNA1P02708 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHRNA1P02708 CNTN5-202ENST00000418526 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHRNA1P02708 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.8□□□□□ -1.32
CHRNA1P02708 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC6.8□□□□□ -1.32
CHRNA1P02708 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.8□□□□□ -1.32
CHRNA1P02708 CC2D2B-202ENST00000410012 1792 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
CHRNA1P02708 MAPK10-366ENST00000641903 2812 ntAPPRIS ALT1 BASIC6.8□□□□□ -1.32
CHRNA1P02708 EPG5-201ENST00000282041 12633 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHRNA1P02708 IFNA8-201ENST00000380205 1039 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CHRNA1P02708 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHRNA1P02708 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHRNA1P02708 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC6.8□□□□□ -1.32
CHRNA1P02708 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC6.8□□□□□ -1.32
CHRNA1P02708 CREM-217ENST00000439705 2306 ntTSL 5 BASIC6.8□□□□□ -1.32
CHRNA1P02708 IL1RAP-212ENST00000443369 2760 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHRNA1P02708 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC6.8□□□□□ -1.32
CHRNA1P02708 AC005077.1-201ENST00000449226 375 ntBASIC6.8□□□□□ -1.32
CHRNA1P02708 VPS25P1-201ENST00000455691 508 ntBASIC6.8□□□□□ -1.32
CHRNA1P02708 RN7SL174P-201ENST00000475578 289 ntBASIC6.8□□□□□ -1.32
CHRNA1P02708 RNU6ATAC39P-201ENST00000516309 149 ntBASIC6.8□□□□□ -1.32
CHRNA1P02708 HAVCR1-204ENST00000522693 1713 ntAPPRIS ALT2 TSL 2 BASIC6.8□□□□□ -1.32
CHRNA1P02708 LINC00929-203ENST00000556213 713 ntTSL 2 BASIC6.8□□□□□ -1.32
CHRNA1P02708 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.8□□□□□ -1.32
CHRNA1P02708 AP000842.3-201ENST00000564354 808 ntTSL 3 BASIC6.8□□□□□ -1.32
CHRNA1P02708 SNHG8-202ENST00000602483 309 ntTSL 3 BASIC6.8□□□□□ -1.32
CHRNA1P02708 CYCSP1-201ENST00000604815 315 ntBASIC6.8□□□□□ -1.32
CHRNA1P02708 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.8□□□□□ -1.32
CHRNA1P02708 AL357153.4-201ENST00000620487 1016 ntBASIC6.8□□□□□ -1.32
CHRNA1P02708 AC096708.4-201ENST00000620563 552 ntBASIC6.8□□□□□ -1.32
CHRNA1P02708 AL136228.1-201ENST00000622221 319 ntBASIC6.8□□□□□ -1.32
CHRNA1P02708 AC016542.2-201ENST00000624201 619 ntBASIC6.8□□□□□ -1.32
CHRNA1P02708 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHRNA1P02708 KCNJ15-220ENST00000612702 3046 ntAPPRIS P1 TSL 4 BASIC6.8□□□□□ -1.32
CHRNA1P02708 MAPK10-287ENST00000641217 3037 ntBASIC6.8□□□□□ -1.32
CHRNA1P02708 TCF7L2-218ENST00000538897 4000 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
CHRNA1P02708 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC6.8□□□□□ -1.32
CHRNA1P02708 ETFBKMT-201ENST00000357721 6128 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
CHRNA1P02708 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC6.8□□□□□ -1.32
CHRNA1P02708 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC6.8□□□□□ -1.32
CHRNA1P02708 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.8□□□□□ -1.32
CHRNA1P02708 BCORP1-202ENST00000441139 3461 ntTSL 2 BASIC6.8□□□□□ -1.32
CHRNA1P02708 OR2T7-201ENST00000641057 3463 ntAPPRIS P1 BASIC6.8□□□□□ -1.32
CHRNA1P02708 INPP5F-208ENST00000637174 3168 ntTSL 5 BASIC6.79□□□□□ -1.32
CHRNA1P02708 ZNF969P-201ENST00000510345 2341 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 LDAH-212ENST00000619656 3663 ntTSL 2 BASIC6.79□□□□□ -1.32
CHRNA1P02708 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 AP4E1-203ENST00000560508 6653 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 RNF19BPY-201ENST00000458209 1550 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 AF287957.1-201ENST00000607368 1595 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 XAGE5-201ENST00000351072 478 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 TCEAL8-201ENST00000360000 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 TCEAL8-202ENST00000372685 1222 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 RNA5SP284-201ENST00000384547 118 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 AC087752.1-201ENST00000391360 558 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 RPL35AP31-201ENST00000418340 337 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 NDUFS5P5-201ENST00000437256 321 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 AL606534.1-201ENST00000439562 694 ntTSL 3 BASIC6.79□□□□□ -1.32
CHRNA1P02708 AC011742.2-201ENST00000443818 352 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 FTLP8-201ENST00000446770 267 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 RANP2-201ENST00000456833 229 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 NXT1P1-201ENST00000458481 316 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 ACA64.1-201ENST00000459171 127 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 AC011476.1-201ENST00000466725 307 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 CRNDE-201ENST00000501177 614 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.79□□□□□ -1.32
CHRNA1P02708 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC6.79□□□□□ -1.32
CHRNA1P02708 COX6C-209ENST00000523016 745 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 KCTD21-AS1-203ENST00000527321 586 ntTSL 3 BASIC6.79□□□□□ -1.32
CHRNA1P02708 AC107884.2-201ENST00000530963 550 ntTSL 4 BASIC6.79□□□□□ -1.32
CHRNA1P02708 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
CHRNA1P02708 AL049629.1-201ENST00000534431 648 ntTSL 3 BASIC6.79□□□□□ -1.32
CHRNA1P02708 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
CHRNA1P02708 OLR1-210ENST00000544577 924 ntTSL 5 BASIC6.79□□□□□ -1.32
CHRNA1P02708 AC027667.1-201ENST00000545814 304 ntBASIC6.79□□□□□ -1.32
CHRNA1P02708 RNASE11-208ENST00000555841 886 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Retrieved 100 of 98,524 protein–RNA pairs in 70.4 ms