Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 SPP1-202ENST00000360804 1196 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
KRT6AP02538 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC6.08□□□□□ -1.44
KRT6AP02538 PEX12P1-201ENST00000400284 1048 ntBASIC6.08□□□□□ -1.44
KRT6AP02538 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC6.08□□□□□ -1.44
KRT6AP02538 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT6AP02538 AC114498.1-201ENST00000423796 607 ntTSL 5 BASIC6.08□□□□□ -1.44
KRT6AP02538 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT6AP02538 AC234771.4-201ENST00000441416 730 ntBASIC6.08□□□□□ -1.44
KRT6AP02538 GAPDHP37-201ENST00000442317 968 ntBASIC6.08□□□□□ -1.44
KRT6AP02538 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT6AP02538 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT6AP02538 BBOF1-202ENST00000463558 550 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
KRT6AP02538 RN7SL83P-201ENST00000468131 297 ntBASIC6.08□□□□□ -1.44
KRT6AP02538 SPINK13-202ENST00000511106 661 ntAPPRIS ALT2 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRT6AP02538 RPA2P3-201ENST00000533268 770 ntBASIC6.08□□□□□ -1.44
KRT6AP02538 OR9G2P-201ENST00000533326 880 ntBASIC6.08□□□□□ -1.44
KRT6AP02538 AC078789.1-201ENST00000547084 477 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT6AP02538 AC068643.1-201ENST00000548594 755 ntTSL 5 BASIC6.08□□□□□ -1.44
KRT6AP02538 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.08□□□□□ -1.44
KRT6AP02538 AC007494.1-201ENST00000562293 760 ntBASIC6.08□□□□□ -1.44
KRT6AP02538 AC090651.1-201ENST00000567865 634 ntBASIC6.08□□□□□ -1.44
KRT6AP02538 LINC01855-201ENST00000585520 396 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT6AP02538 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.08□□□□□ -1.44
KRT6AP02538 AC011516.1-201ENST00000599129 180 ntTSL 3 BASIC6.08□□□□□ -1.44
KRT6AP02538 AC036176.3-201ENST00000602456 418 ntBASIC6.08□□□□□ -1.44
KRT6AP02538 AL591222.2-201ENST00000604443 754 ntBASIC6.08□□□□□ -1.44
KRT6AP02538 AC073218.2-202ENST00000605962 617 ntTSL 5 BASIC6.08□□□□□ -1.44
KRT6AP02538 MIR6070-201ENST00000613967 103 ntBASIC6.08□□□□□ -1.44
KRT6AP02538 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.08□□□□□ -1.44
KRT6AP02538 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.08□□□□□ -1.44
KRT6AP02538 AL162377.2-201ENST00000624532 337 ntBASIC6.08□□□□□ -1.44
KRT6AP02538 AC069542.2-201ENST00000624816 216 ntBASIC6.08□□□□□ -1.44
KRT6AP02538 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC6.08□□□□□ -1.44
KRT6AP02538 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC6.08□□□□□ -1.44
KRT6AP02538 NADK2-201ENST00000282512 2507 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
KRT6AP02538 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
KRT6AP02538 CCDC18-AS1-205ENST00000421202 2973 ntTSL 1 (best) BASIC6.08□□□□□ -1.44
KRT6AP02538 OR2A7-202ENST00000641841 2062 ntAPPRIS P1 BASIC6.08□□□□□ -1.44
KRT6AP02538 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC6.08□□□□□ -1.44
KRT6AP02538 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.07□□□□□ -1.44
KRT6AP02538 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT6AP02538 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.07□□□□□ -1.44
KRT6AP02538 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
KRT6AP02538 RPL23AP82-206ENST00000480246 2987 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRT6AP02538 AL136984.1-201ENST00000607611 1893 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
KRT6AP02538 IL23R-201ENST00000347310 2912 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT6AP02538 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT6AP02538 AL449283.1-201ENST00000602631 3403 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT6AP02538 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
KRT6AP02538 PCLO-201ENST00000333891 20329 ntAPPRIS P1 TSL 2 BASIC6.07□□□□□ -1.44
KRT6AP02538 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT6AP02538 AL445238.1-204ENST00000400311 463 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 NPM1P38-201ENST00000403835 865 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 MIR1266-201ENST00000408125 84 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 RN7SKP129-201ENST00000410288 299 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC6.07□□□□□ -1.44
KRT6AP02538 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.07□□□□□ -1.44
KRT6AP02538 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.07□□□□□ -1.44
KRT6AP02538 MORF4-201ENST00000447135 971 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 RPS27AP3-201ENST00000453803 454 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 RPL31P11-202ENST00000454082 372 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 SSBP1-205ENST00000465582 731 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
KRT6AP02538 AC090602.1-201ENST00000469695 252 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 RN7SL643P-201ENST00000471845 291 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 RPS7P11-201ENST00000484240 586 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC6.07□□□□□ -1.44
KRT6AP02538 AC093766.1-201ENST00000502606 866 ntTSL 3 BASIC6.07□□□□□ -1.44
KRT6AP02538 NPM1P21-201ENST00000513394 762 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT6AP02538 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.07□□□□□ -1.44
KRT6AP02538 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.07□□□□□ -1.44
KRT6AP02538 AC005332.4-201ENST00000592752 579 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 AC010326.3-201ENST00000597780 679 ntTSL 5 BASIC6.07□□□□□ -1.44
KRT6AP02538 Metazoa_SRP.134-201ENST00000610965 327 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.07□□□□□ -1.44
KRT6AP02538 AL109924.4-201ENST00000623089 670 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 AC068213.1-201ENST00000625124 226 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 AC003992.1-201ENST00000635364 557 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT6AP02538 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
KRT6AP02538 RYR3-212ENST00000634891 15591 ntAPPRIS P3 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT6AP02538 AC096921.2-201ENST00000561507 1916 ntBASIC6.07□□□□□ -1.44
KRT6AP02538 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT6AP02538 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
KRT6AP02538 HIPK1-204ENST00000369555 3966 ntTSL 5 BASIC6.07□□□□□ -1.44
KRT6AP02538 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.07□□□□□ -1.44
KRT6AP02538 DAZ2-204ENST00000382431 3637 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRT6AP02538 AC025470.1-201ENST00000510053 2032 ntBASIC6.06□□□□□ -1.44
KRT6AP02538 LINC00616-205ENST00000514600 2017 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
KRT6AP02538 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
KRT6AP02538 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRT6AP02538 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.06□□□□□ -1.44
KRT6AP02538 NPHP1-204ENST00000417665 2246 ntTSL 5 BASIC6.06□□□□□ -1.44
KRT6AP02538 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRT6AP02538 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.06□□□□□ -1.44
KRT6AP02538 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
KRT6AP02538 OR5AQ1P-203ENST00000641818 1529 ntBASIC6.06□□□□□ -1.44
KRT6AP02538 OR5B2-202ENST00000641342 2184 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms