Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AC023886.2-201ENST00000321285 411 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 RNU6-1251P-201ENST00000364502 107 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 U3.14-201ENST00000365363 227 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 RNU6-468P-201ENST00000384003 109 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 IGBP1-AS2-201ENST00000403371 513 ntTSL 3 BASIC6.44□□□□□ -1.38
CNOT4O95628 AL158050.1-201ENST00000416077 457 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 MICG-208ENST00000416822 132 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 TRGV6-201ENST00000417928 299 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 SEPT2P1-201ENST00000419651 180 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 SLC4A1APP1-201ENST00000419995 602 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 AL359633.1-201ENST00000421403 310 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC6.44□□□□□ -1.38
CNOT4O95628 AL096799.1-201ENST00000425900 381 ntTSL 2 BASIC6.44□□□□□ -1.38
CNOT4O95628 AL583785.1-201ENST00000428006 512 ntTSL 2 BASIC6.44□□□□□ -1.38
CNOT4O95628 LINC01522-201ENST00000428999 429 ntTSL 2 BASIC6.44□□□□□ -1.38
CNOT4O95628 GAPDHP34-201ENST00000432112 823 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 AL513303.1-201ENST00000432452 591 ntTSL 2 BASIC6.44□□□□□ -1.38
CNOT4O95628 PIP5K1P2-201ENST00000437005 1120 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 FABP5P3-201ENST00000437960 408 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 Z84478.1-201ENST00000438230 1219 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 MED6P1-201ENST00000439659 713 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 ARAFP2-201ENST00000440565 559 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 HMGB1P26-201ENST00000452520 628 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 AL354872.1-201ENST00000456361 967 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 AP002345.1-201ENST00000456493 928 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 AL391863.1-202ENST00000457427 612 ntTSL 5 BASIC6.44□□□□□ -1.38
CNOT4O95628 AC091976.1-201ENST00000458002 448 ntTSL 3 BASIC6.44□□□□□ -1.38
CNOT4O95628 WBP1LP1-201ENST00000460451 896 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 RN7SL456P-201ENST00000469290 295 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 RPS17P11-201ENST00000474297 293 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 SYT14P1-201ENST00000481459 721 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 NPM1P29-201ENST00000483112 803 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.44□□□□□ -1.38
CNOT4O95628 AC010655.2-201ENST00000493710 662 ntTSL 3 BASIC6.44□□□□□ -1.38
CNOT4O95628 RPS20-202ENST00000518875 671 ntTSL 2 BASIC6.44□□□□□ -1.38
CNOT4O95628 RPL10P18-201ENST00000519384 309 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC6.44□□□□□ -1.38
CNOT4O95628 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC6.44□□□□□ -1.38
CNOT4O95628 LRRC6P1-201ENST00000532188 885 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 AP003717.3-201ENST00000544832 1180 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 AC119044.1-202ENST00000548463 339 ntTSL 2 BASIC6.44□□□□□ -1.38
CNOT4O95628 LYZ-202ENST00000548839 558 ntTSL 2 BASIC6.44□□□□□ -1.38
CNOT4O95628 AC093014.1-201ENST00000548926 724 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 HMGN1P26-201ENST00000558737 303 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 SNORD39.2-201ENST00000579995 76 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 AC005726.4-201ENST00000582858 458 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 ZNF561-AS1-208ENST00000592851 782 ntTSL 3 BASIC6.44□□□□□ -1.38
CNOT4O95628 AL353778.1-201ENST00000603149 408 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC6.44□□□□□ -1.38
CNOT4O95628 AC005332.10-201ENST00000612725 619 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 MALAT1-214ENST00000618925 424 ntTSL 5 BASIC6.44□□□□□ -1.38
CNOT4O95628 AC015660.5-201ENST00000623238 564 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC6.44□□□□□ -1.38
CNOT4O95628 PDAP1-205ENST00000626285 120 ntTSL 5 BASIC6.44□□□□□ -1.38
CNOT4O95628 AC083865.1-201ENST00000636634 831 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 AC006927.2-201ENST00000639256 389 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 ZNF532-223ENST00000591230 4450 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 OR6Y1-203ENST00000641622 5128 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
CNOT4O95628 GRIK2-205ENST00000369138 4921 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 ZNF521-214ENST00000584787 4327 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 AL589993.1-201ENST00000407450 2524 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 LINC01095-202ENST00000507726 1715 ntTSL 2 BASIC6.44□□□□□ -1.38
CNOT4O95628 NLGN4X-202ENST00000381092 3750 ntAPPRIS P2 TSL 2 BASIC6.44□□□□□ -1.38
CNOT4O95628 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CNOT4O95628 KIF18A-201ENST00000263181 3568 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 LSM8-204ENST00000424702 4030 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 LINC02466-201ENST00000500092 1963 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 IL5RA-204ENST00000418488 5521 ntTSL 5 BASIC6.44□□□□□ -1.38
CNOT4O95628 NUP43-201ENST00000340413 3874 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 ZNF714-202ENST00000456283 6812 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CNOT4O95628 FCHSD2-203ENST00000409314 4509 ntTSL 5 BASIC6.44□□□□□ -1.38
CNOT4O95628 CEBPZ-201ENST00000234170 3463 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CNOT4O95628 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC6.44□□□□□ -1.38
CNOT4O95628 MTND4P34-201ENST00000572715 1371 ntBASIC6.44□□□□□ -1.38
CNOT4O95628 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC6.44□□□□□ -1.38
CNOT4O95628 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC6.43□□□□□ -1.38
CNOT4O95628 ZC3H11A-202ENST00000367210 5877 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNOT4O95628 SPECC1L-207ENST00000541492 3525 ntTSL 2 BASIC6.43□□□□□ -1.38
CNOT4O95628 TMC5-205ENST00000542583 4872 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
CNOT4O95628 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
CNOT4O95628 MUSK-205ENST00000374448 2754 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CNOT4O95628 CAPS2-205ENST00000409445 2135 ntTSL 2 BASIC6.43□□□□□ -1.38
CNOT4O95628 KIAA0586-201ENST00000261244 4807 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNOT4O95628 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CNOT4O95628 SLC17A8-201ENST00000323346 3983 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNOT4O95628 ABCD3-202ENST00000370214 3538 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNOT4O95628 LIMA1-216ENST00000552909 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNOT4O95628 BBOX1-204ENST00000528583 1724 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CNOT4O95628 RAD1P1-201ENST00000231383 813 ntBASIC6.43□□□□□ -1.38
CNOT4O95628 OR4A16-201ENST00000314721 1081 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
CNOT4O95628 PDXDC1-201ENST00000325823 1113 ntTSL 5 BASIC6.43□□□□□ -1.38
CNOT4O95628 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC6.43□□□□□ -1.38
CNOT4O95628 RN7SKP184-201ENST00000362348 333 ntBASIC6.43□□□□□ -1.38
CNOT4O95628 RN7SKP149-201ENST00000363008 344 ntBASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms