Protein–RNA interactions for Protein: O60902

SHOX2, Short stature homeobox protein 2, humanhuman

Predicted RBP Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2O60902 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHOX2O60902 AL359634.1-201ENST00000429807 1179 ntTSL 5 BASIC6.16□□□□□ -1.42
SHOX2O60902 AP001628.1-201ENST00000431150 285 ntTSL 5 BASIC6.16□□□□□ -1.42
SHOX2O60902 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC6.16□□□□□ -1.42
SHOX2O60902 LINC01221-201ENST00000432488 662 ntTSL 3 BASIC6.16□□□□□ -1.42
SHOX2O60902 AC242426.1-201ENST00000435270 960 ntBASIC6.16□□□□□ -1.42
SHOX2O60902 CR391992.1-201ENST00000438601 394 ntBASIC6.16□□□□□ -1.42
SHOX2O60902 LINC00271-203ENST00000438618 1202 ntTSL 3 BASIC6.16□□□□□ -1.42
SHOX2O60902 NPSR1-AS1-206ENST00000439852 710 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHOX2O60902 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.16□□□□□ -1.42
SHOX2O60902 RPL36AP55-201ENST00000454114 305 ntBASIC6.16□□□□□ -1.42
SHOX2O60902 ETDA-202ENST00000454551 388 ntAPPRIS P1 TSL 3 BASIC6.16□□□□□ -1.42
SHOX2O60902 CBX5P1-201ENST00000468470 561 ntBASIC6.16□□□□□ -1.42
SHOX2O60902 EIF3LP3-201ENST00000495197 822 ntBASIC6.16□□□□□ -1.42
SHOX2O60902 RPL10P7-201ENST00000495649 625 ntBASIC6.16□□□□□ -1.42
SHOX2O60902 AC139713.2-212ENST00000506982 832 ntTSL 5 BASIC6.16□□□□□ -1.42
SHOX2O60902 AC002456.2-201ENST00000509356 380 ntBASIC6.16□□□□□ -1.42
SHOX2O60902 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC6.16□□□□□ -1.42
SHOX2O60902 AC008601.1-201ENST00000519892 527 ntTSL 4 BASIC6.16□□□□□ -1.42
SHOX2O60902 TPM3P3-201ENST00000521343 354 ntBASIC6.16□□□□□ -1.42
SHOX2O60902 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.16□□□□□ -1.42
SHOX2O60902 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.16□□□□□ -1.42
SHOX2O60902 AC015818.3-202ENST00000579603 283 ntTSL 5 BASIC6.16□□□□□ -1.42
SHOX2O60902 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.16□□□□□ -1.42
SHOX2O60902 AC119501.1-201ENST00000603646 475 ntBASIC6.16□□□□□ -1.42
SHOX2O60902 AC097467.3-215ENST00000609486 793 ntTSL 5 BASIC6.16□□□□□ -1.42
SHOX2O60902 AC097467.3-214ENST00000610249 843 ntTSL 5 BASIC6.16□□□□□ -1.42
SHOX2O60902 MIR6889-201ENST00000613185 59 ntBASIC6.16□□□□□ -1.42
SHOX2O60902 ALKAL2-208ENST00000619265 496 ntTSL 2 BASIC6.16□□□□□ -1.42
SHOX2O60902 AC138965.3-201ENST00000623875 498 ntBASIC6.16□□□□□ -1.42
SHOX2O60902 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.16□□□□□ -1.42
SHOX2O60902 ZNF214-204ENST00000536068 2562 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHOX2O60902 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHOX2O60902 VWC2L-201ENST00000312504 4610 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHOX2O60902 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHOX2O60902 TET1-201ENST00000373644 9288 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHOX2O60902 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHOX2O60902 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC6.16□□□□□ -1.42
SHOX2O60902 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.16□□□□□ -1.42
SHOX2O60902 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC6.16□□□□□ -1.42
SHOX2O60902 ZFYVE16-206ENST00000510158 6680 ntAPPRIS P1 TSL 1 (best) BASIC6.16□□□□□ -1.42
SHOX2O60902 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC6.16□□□□□ -1.42
SHOX2O60902 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHOX2O60902 NDRG3-201ENST00000349004 2964 ntAPPRIS P4 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHOX2O60902 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHOX2O60902 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.15□□□□□ -1.42
SHOX2O60902 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC6.15□□□□□ -1.42
SHOX2O60902 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHOX2O60902 SMAP1-206ENST00000619054 3150 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHOX2O60902 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHOX2O60902 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHOX2O60902 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC6.15□□□□□ -1.42
SHOX2O60902 GPS2P1-201ENST00000411761 986 ntBASIC6.15□□□□□ -1.42
SHOX2O60902 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.15□□□□□ -1.42
SHOX2O60902 AL139184.1-202ENST00000422303 222 ntBASIC6.15□□□□□ -1.42
SHOX2O60902 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC6.15□□□□□ -1.42
SHOX2O60902 AC009518.3-201ENST00000438972 253 ntBASIC6.15□□□□□ -1.42
SHOX2O60902 AC092421.1-201ENST00000448148 418 ntBASIC6.15□□□□□ -1.42
SHOX2O60902 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.15□□□□□ -1.42
SHOX2O60902 OR7E157P-201ENST00000494376 911 ntBASIC6.15□□□□□ -1.42
SHOX2O60902 AL135933.1-201ENST00000498657 802 ntBASIC6.15□□□□□ -1.42
SHOX2O60902 OR7E99P-201ENST00000505750 922 ntBASIC6.15□□□□□ -1.42
SHOX2O60902 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.15□□□□□ -1.42
SHOX2O60902 RNA5SP318-201ENST00000516352 92 ntBASIC6.15□□□□□ -1.42
SHOX2O60902 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC6.15□□□□□ -1.42
SHOX2O60902 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.15□□□□□ -1.42
SHOX2O60902 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.15□□□□□ -1.42
SHOX2O60902 AC007068.2-201ENST00000543168 395 ntBASIC6.15□□□□□ -1.42
SHOX2O60902 LINC02308-201ENST00000555001 637 ntTSL 2 BASIC6.15□□□□□ -1.42
SHOX2O60902 AC013652.1-204ENST00000558209 489 ntTSL 3 BASIC6.15□□□□□ -1.42
SHOX2O60902 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.42
SHOX2O60902 AC018521.2-202ENST00000582142 473 ntTSL 2 BASIC6.15□□□□□ -1.42
SHOX2O60902 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC6.15□□□□□ -1.42
SHOX2O60902 COX6CP16-201ENST00000603667 216 ntBASIC6.15□□□□□ -1.42
SHOX2O60902 AL035417.2-201ENST00000603887 796 ntBASIC6.15□□□□□ -1.42
SHOX2O60902 LSM1P2-201ENST00000604911 322 ntBASIC6.15□□□□□ -1.42
SHOX2O60902 MIR6133-201ENST00000617057 108 ntBASIC6.15□□□□□ -1.42
SHOX2O60902 AL035425.4-201ENST00000624509 1063 ntBASIC6.15□□□□□ -1.42
SHOX2O60902 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC6.15□□□□□ -1.42
SHOX2O60902 PSMC1P4-201ENST00000515236 1327 ntBASIC6.15□□□□□ -1.43
SHOX2O60902 LRRC8B-201ENST00000330947 7593 ntAPPRIS P1 TSL 5 BASIC6.15□□□□□ -1.43
SHOX2O60902 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHOX2O60902 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHOX2O60902 BRIP1-201ENST00000259008 6048 ntAPPRIS P2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHOX2O60902 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC6.15□□□□□ -1.43
SHOX2O60902 PHACTR2P1-201ENST00000605639 1414 ntBASIC6.15□□□□□ -1.43
SHOX2O60902 LZTFL1-215ENST00000536047 4342 ntTSL 2 BASIC6.15□□□□□ -1.43
SHOX2O60902 LINC01990-201ENST00000609293 1487 ntTSL 1 (best) BASIC6.15□□□□□ -1.43
SHOX2O60902 PHACTR2-207ENST00000427704 9531 ntAPPRIS ALT2 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHOX2O60902 GIF-201ENST00000257248 1518 ntAPPRIS P1 TSL 1 (best) BASIC6.15□□□□□ -1.43
SHOX2O60902 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHOX2O60902 ZNF283-201ENST00000324461 2297 ntAPPRIS P1 TSL 1 (best) BASIC6.14□□□□□ -1.43
SHOX2O60902 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.14□□□□□ -1.43
SHOX2O60902 ESRRG-205ENST00000366937 5365 ntTSL 1 (best) BASIC6.14□□□□□ -1.43
SHOX2O60902 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC6.14□□□□□ -1.43
SHOX2O60902 HYPM-201ENST00000341016 501 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SHOX2O60902 MIR205HG-201ENST00000366437 704 ntTSL 3 BASIC6.14□□□□□ -1.43
SHOX2O60902 RNA5SP176-201ENST00000390956 110 ntBASIC6.14□□□□□ -1.43
SHOX2O60902 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.14□□□□□ -1.43
SHOX2O60902 RNASE9-202ENST00000404716 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC6.14□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 101.5 ms