Protein–RNA interactions for Protein: A6XGL0

YJEFN3, YjeF N-terminal domain-containing protein 3, humanhuman

Predictions only

Length 299 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
YJEFN3A6XGL0 MDM4-217ENST00000621032 5592 ntTSL 2 BASIC6.43□□□□□ -1.38
YJEFN3A6XGL0 HSDL2-201ENST00000398803 2983 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
YJEFN3A6XGL0 CACNB2-215ENST00000615785 3707 ntTSL 5 BASIC6.43□□□□□ -1.38
YJEFN3A6XGL0 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC6.43□□□□□ -1.38
YJEFN3A6XGL0 RPS2P45-201ENST00000469997 2057 ntBASIC6.43□□□□□ -1.38
YJEFN3A6XGL0 CCDC190-202ENST00000367911 1395 ntAPPRIS P2 TSL 3 BASIC6.43□□□□□ -1.38
YJEFN3A6XGL0 HSPD1P9-201ENST00000420325 1636 ntBASIC6.43□□□□□ -1.38
YJEFN3A6XGL0 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
YJEFN3A6XGL0 AL353763.1-201ENST00000624467 1628 ntBASIC6.43□□□□□ -1.38
YJEFN3A6XGL0 AC093277.1-201ENST00000637776 1622 ntTSL 5 BASIC6.43□□□□□ -1.38
YJEFN3A6XGL0 KIF27-202ENST00000334204 4400 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
YJEFN3A6XGL0 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 RBM41-201ENST00000372479 1662 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 KLHL5-203ENST00000381930 3288 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 AL359091.1-201ENST00000449048 1734 ntBASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 SPATA6-202ENST00000371843 2297 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 ABCB5-203ENST00000406935 1483 ntTSL 2 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 AC004690.2-201ENST00000472838 1754 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 KLRD1-203ENST00000350274 3165 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 ARMCX5-202ENST00000372742 2647 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 OR4K13-202ENST00000641664 5980 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 STX19-201ENST00000315099 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 RNA5SP375-201ENST00000362975 119 ntBASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 CCDC186-203ENST00000369287 7245 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 MIR130B-202ENST00000385018 82 ntBASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 TRAV1-2-201ENST00000390423 402 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 AL132875.1-201ENST00000403623 949 ntBASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 AL109610.1-201ENST00000414598 431 ntTSL 3 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 AC007562.1-201ENST00000421819 517 ntBASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 AC023274.2-201ENST00000445264 521 ntBASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 RBMY2AP-201ENST00000445405 1157 ntBASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 RBMY2CP-201ENST00000448575 1157 ntBASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 RBMY2DP-202ENST00000448881 1157 ntBASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 RBMY2BP-202ENST00000451071 1156 ntBASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 AL136982.3-201ENST00000454709 688 ntTSL 3 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 PFN2-209ENST00000481275 560 ntTSL 4 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 OR6M2P-201ENST00000529831 871 ntBASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 AC005363.1-201ENST00000530779 351 ntBASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 AC027667.1-201ENST00000545814 304 ntBASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 MED21-206ENST00000546323 575 ntTSL 3 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 AC092332.1-201ENST00000563684 829 ntBASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 AC106037.2-201ENST00000578583 447 ntTSL 5 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 AC020916.2-201ENST00000591242 360 ntBASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 PCBP1-AS1-360ENST00000630377 598 ntTSL 5 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 TEK-202ENST00000406359 3935 ntTSL 2 BASIC6.42□□□□□ -1.38
YJEFN3A6XGL0 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 CHD6-203ENST00000373233 10818 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 ZNF813-201ENST00000396403 6151 ntAPPRIS P1 TSL 3 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 MAGI2-235ENST00000637282 3174 ntTSL 5 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AIMP1-203ENST00000442366 2519 ntAPPRIS P3 TSL 5 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 PAPD4-203ENST00000428308 2204 ntAPPRIS P3 TSL 2 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 HTR2A-202ENST00000542664 5429 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AC009779.8-201ENST00000641684 4384 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 TMEM167B-201ENST00000338272 3730 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 NF1-202ENST00000358273 12425 ntAPPRIS ALT1 TSL 1 (best) BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 TNP1-201ENST00000236979 407 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AP003170.5-201ENST00000397185 335 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 OR7E156P-201ENST00000400303 464 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 TMA16P2-201ENST00000413187 601 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AL096829.1-201ENST00000413677 457 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 RPL35AP31-201ENST00000418340 337 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 SDCBP-203ENST00000424270 1277 ntAPPRIS ALT1 TSL 2 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 SEPT14P12-201ENST00000442280 560 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 ZNF619P1-201ENST00000446539 752 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AC112187.1-201ENST00000455837 479 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AC009963.3-201ENST00000458090 486 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AC112496.1-201ENST00000497961 562 ntTSL 5 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 RBBP4P1-201ENST00000502424 1276 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AC114956.1-201ENST00000504277 512 ntTSL 5 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 CRYAB-205ENST00000526180 1017 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AC090115.2-201ENST00000548060 883 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 LINC01999-201ENST00000592917 646 ntTSL 2 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AL049840.6-202ENST00000603373 279 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 AC092266.1-201ENST00000610958 165 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 RN7SL261P-201ENST00000613441 282 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 MSR1-202ENST00000350896 3572 ntTSL 5 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 CCNT2P1-201ENST00000423082 1315 ntBASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 SORBS1-202ENST00000306402 5858 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 GNS-202ENST00000418919 4877 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
YJEFN3A6XGL0 CAST-203ENST00000338252 2972 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 85.3 ms