Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 ZFP62-201ENST00000502412 3415 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 ZNF112-202ENST00000354340 3654 ntAPPRIS P3 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 FGF1-202ENST00000359370 3660 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 LMOD3-201ENST00000420581 4086 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 ATP6V1A-201ENST00000273398 4591 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 BCORP1-203ENST00000513194 5093 ntBASIC5.2□□□□□ -1.58
TMEM235A6NFC5 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 AC089998.1-201ENST00000548575 3141 ntBASIC5.2□□□□□ -1.58
TMEM235A6NFC5 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 SNORA77.2-201ENST00000408571 112 ntBASIC5.2□□□□□ -1.58
TMEM235A6NFC5 MIR646HG-202ENST00000426753 651 ntTSL 2 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 E2F6P1-201ENST00000428850 745 ntBASIC5.2□□□□□ -1.58
TMEM235A6NFC5 AC013403.1-201ENST00000436954 263 ntBASIC5.2□□□□□ -1.58
TMEM235A6NFC5 E2F6P3-201ENST00000441743 743 ntBASIC5.2□□□□□ -1.58
TMEM235A6NFC5 GAPDHP23-201ENST00000444823 993 ntBASIC5.2□□□□□ -1.58
TMEM235A6NFC5 LINC01105-205ENST00000450794 580 ntTSL 4 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 LINC01006-207ENST00000458645 738 ntTSL 4 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 RN7SL369P-201ENST00000477138 299 ntBASIC5.2□□□□□ -1.58
TMEM235A6NFC5 MGAT4D-201ENST00000503109 1281 ntAPPRIS ALT2 TSL 5 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 AL158068.2-201ENST00000510632 563 ntTSL 4 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 AC114940.1-201ENST00000512162 1265 ntBASIC5.2□□□□□ -1.58
TMEM235A6NFC5 AC139713.1-202ENST00000512366 460 ntBASIC5.2□□□□□ -1.58
TMEM235A6NFC5 SCARNA11.1-201ENST00000516918 132 ntBASIC5.2□□□□□ -1.58
TMEM235A6NFC5 AC023866.2-201ENST00000521378 387 ntTSL 3 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 ZEB2-AS1-206ENST00000602006 572 ntTSL 5 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 AC024651.2-201ENST00000562480 2098 ntBASIC5.2□□□□□ -1.58
TMEM235A6NFC5 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 PCGF5-205ENST00000614189 7037 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 TTBK2-201ENST00000267890 10905 ntAPPRIS P2 TSL 5 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 AC092451.3-201ENST00000625067 1343 ntBASIC5.2□□□□□ -1.58
TMEM235A6NFC5 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.2□□□□□ -1.58
TMEM235A6NFC5 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 SAMM50P1-201ENST00000455403 1399 ntBASIC5.19□□□□□ -1.58
TMEM235A6NFC5 NRXN1-242ENST00000635519 3553 ntTSL 5 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AC004076.2-201ENST00000620532 3323 ntBASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 INSL4-201ENST00000239316 1952 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 SPINK7-201ENST00000274565 557 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 SDHAF3-201ENST00000360382 731 ntTSL 2 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 RNA5SP429-201ENST00000363688 109 ntBASIC5.19□□□□□ -1.58
TMEM235A6NFC5 MEPE-202ENST00000395102 2123 ntAPPRIS ALT2 TSL 5 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 CDC42P6-201ENST00000421246 576 ntBASIC5.19□□□□□ -1.58
TMEM235A6NFC5 PTPN2P1-201ENST00000423212 1072 ntBASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AL034397.2-201ENST00000424241 857 ntTSL 2 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 RPS7P14-201ENST00000426405 583 ntBASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 COL11A2P1-205ENST00000441798 676 ntBASIC5.19□□□□□ -1.58
TMEM235A6NFC5 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 RBMY2EP-202ENST00000456360 940 ntBASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AC108751.3-201ENST00000461814 1020 ntBASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AC239804.1-201ENST00000466343 869 ntTSL 5 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AC097486.1-201ENST00000515331 210 ntBASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AC103831.1-201ENST00000522228 422 ntTSL 3 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AC136777.2-201ENST00000522979 358 ntBASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 UBE2N-204ENST00000549833 960 ntTSL 3 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 LINC01895-201ENST00000558690 404 ntTSL 5 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 ARL17A-205ENST00000573185 581 ntAPPRIS ALT2 TSL 3 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 ARL17B-206ENST00000575698 581 ntTSL 3 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AC007923.1-201ENST00000577970 505 ntTSL 4 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 VDAC1P8-204ENST00000589489 997 ntTSL 5 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 ZNF431-206ENST00000599296 586 ntTSL 5 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AC025857.2-201ENST00000602711 238 ntBASIC5.19□□□□□ -1.58
TMEM235A6NFC5 MIR6731-201ENST00000614863 72 ntBASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AL121985.3-201ENST00000620690 523 ntBASIC5.19□□□□□ -1.58
TMEM235A6NFC5 AC244517.6-202ENST00000623884 566 ntAPPRIS P1 TSL 4 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 IGF1-202ENST00000337514 7359 ntAPPRIS P3 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 RGS22-215ENST00000523437 3975 ntAPPRIS ALT2 TSL 1 (best) BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 TCF7L2-219ENST00000542695 4136 ntTSL 5 BASIC5.19□□□□□ -1.58
TMEM235A6NFC5 PNISR-202ENST00000438806 3142 ntAPPRIS P1 TSL 2 BASIC5.19□□□□□ -1.58
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms