Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 U1.25-201ENST00000614085 162 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 BMS1P14-201ENST00000615056 606 ntTSL 5 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 U1.34-201ENST00000618578 162 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 U1.31-201ENST00000620022 160 ntBASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 PSD3-202ENST00000327040 11689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 SCN2A-202ENST00000375427 8553 ntAPPRIS ALT1 TSL 5 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 ERC1-222ENST00000589028 9202 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 SETD2-202ENST00000409792 8142 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC5.52□□□□□ -1.53
RHBDD3Q9Y3P4 AADAT-202ENST00000353187 2101 ntAPPRIS P3 TSL 2 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 ATP13A4-202ENST00000342695 4208 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 SMG1P5-202ENST00000529428 4219 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 SMG1P2-201ENST00000566127 4221 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 SNORD35A-201ENST00000363389 86 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 PAGE2-201ENST00000374965 456 ntTSL 2 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 MIR1266-201ENST00000408125 84 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 RN7SKP281-201ENST00000410472 352 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 RPS26P38-201ENST00000414476 348 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AC007562.1-201ENST00000421819 517 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AC083862.1-201ENST00000427378 1242 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 RPL34P27-201ENST00000428810 349 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 MED28P4-201ENST00000433137 572 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 LRRC23-208ENST00000436789 796 ntTSL 3 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 BX679664.2-201ENST00000439282 283 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AC023274.2-201ENST00000445264 521 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 RAB7A-205ENST00000485280 507 ntTSL 3 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AC114728.1-201ENST00000488289 483 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AL035690.1-201ENST00000490892 383 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AZIN1-AS1-211ENST00000520455 480 ntTSL 3 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 CTNNA3-205ENST00000545309 555 ntTSL 5 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 LINC02457-201ENST00000552992 596 ntTSL 4 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AC018845.1-201ENST00000564193 744 ntTSL 2 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AC016839.1-201ENST00000578162 867 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AC036176.3-201ENST00000602456 418 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 IGKV2OR2-7D-201ENST00000603664 304 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 IGKV2OR2-7-201ENST00000604652 304 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AL021368.3-201ENST00000607119 578 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AL352984.2-202ENST00000613699 155 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 UBA3-213ENST00000631029 123 ntTSL 5 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 LINC02495-203ENST00000636704 242 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 DNM1P47-202ENST00000561463 15043 ntTSL 5 BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 AKAP17BP-201ENST00000431706 2719 ntBASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 FAM83B-201ENST00000306858 3167 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
RHBDD3Q9Y3P4 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 CABYR-207ENST00000486759 1664 ntAPPRIS P4 TSL 5 BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 AP001284.1-201ENST00000528393 2118 ntBASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 OCM2-201ENST00000257627 696 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 RNA5SP478-201ENST00000364657 115 ntBASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 RNU1-84P-201ENST00000365447 164 ntBASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 PLIN2-203ENST00000380465 631 ntTSL 2 BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 RN7SKP221-201ENST00000410420 301 ntBASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 AC079763.1-201ENST00000441295 738 ntTSL 3 BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 AC234771.4-201ENST00000441416 730 ntBASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 AC147651.1-201ENST00000453149 572 ntTSL 2 BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 AC022730.1-201ENST00000473114 568 ntBASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 AC108866.1-204ENST00000508362 558 ntTSL 4 BASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 AC106800.3-201ENST00000511389 308 ntBASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 AC093664.1-201ENST00000511779 289 ntBASIC5.5□□□□□ -1.53
RHBDD3Q9Y3P4 AC084851.2-201ENST00000530377 364 ntBASIC5.5□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms