Protein–RNA interactions for Protein: Q9NPC8

SIX2, Homeobox protein SIX2, humanhuman

Predictions only

Length 291 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX2Q9NPC8 AC096669.1-201ENST00000422203 648 ntTSL 5 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 ZNF619P1-201ENST00000446539 752 ntBASIC6.55□□□□□ -1.36
SIX2Q9NPC8 LINC01809-201ENST00000448431 303 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 CEACAMP11-201ENST00000455211 583 ntBASIC6.55□□□□□ -1.36
SIX2Q9NPC8 RN7SL552P-201ENST00000462094 276 ntBASIC6.55□□□□□ -1.36
SIX2Q9NPC8 AC104411.1-201ENST00000480817 320 ntTSL 3 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 RPL12P30-201ENST00000488389 499 ntBASIC6.55□□□□□ -1.36
SIX2Q9NPC8 AC090150.1-201ENST00000521408 585 ntTSL 4 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 ASPH-226ENST00000522919 1277 ntTSL 3 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 C3orf14-207ENST00000542214 768 ntAPPRIS P1 TSL 1 (best) BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 AC022469.1-201ENST00000555291 656 ntTSL 3 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 ARGFXP2-201ENST00000579304 949 ntBASIC6.55□□□□□ -1.36
SIX2Q9NPC8 IFIT2-201ENST00000371826 3489 ntAPPRIS P2 TSL 1 (best) BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 PAK3-203ENST00000372007 8940 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 CSMD2-206ENST00000373388 13118 ntAPPRIS P3 TSL 1 (best) BASIC6.55□□□□□ -1.36
SIX2Q9NPC8 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 TMEM132B-201ENST00000299308 10906 ntAPPRIS P3 TSL 5 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 SUCLG1-201ENST00000393868 1475 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 CADM2-202ENST00000405615 1314 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 RORA-203ENST00000335670 10844 ntAPPRIS P3 TSL 1 (best) BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 SNW1-205ENST00000555761 1855 ntTSL 2 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 OR2AH1P-202ENST00000641232 2744 ntBASIC6.54□□□□□ -1.36
SIX2Q9NPC8 DNAJC15-201ENST00000379221 7853 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 FPGT-TNNI3K-201ENST00000370893 1195 ntTSL 2 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 RN7SKP166-201ENST00000410812 305 ntBASIC6.54□□□□□ -1.36
SIX2Q9NPC8 AL137071.1-201ENST00000422150 243 ntTSL 3 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 AL157834.1-201ENST00000422744 420 ntTSL 3 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 RPL34P27-201ENST00000428810 349 ntBASIC6.54□□□□□ -1.36
SIX2Q9NPC8 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 SDC4P-201ENST00000453285 601 ntBASIC6.54□□□□□ -1.36
SIX2Q9NPC8 RN7SL352P-201ENST00000466002 277 ntBASIC6.54□□□□□ -1.36
SIX2Q9NPC8 OR7E22P-201ENST00000478335 1035 ntBASIC6.54□□□□□ -1.36
SIX2Q9NPC8 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 RN7SKP67-201ENST00000515905 235 ntBASIC6.54□□□□□ -1.36
SIX2Q9NPC8 PYDC2-201ENST00000518817 294 ntAPPRIS P1 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 MT1CP-201ENST00000567054 174 ntBASIC6.54□□□□□ -1.36
SIX2Q9NPC8 AC005726.5-201ENST00000585189 298 ntTSL 5 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 AL135999.3-201ENST00000610501 812 ntBASIC6.54□□□□□ -1.36
SIX2Q9NPC8 AL136097.3-201ENST00000611097 505 ntBASIC6.54□□□□□ -1.36
SIX2Q9NPC8 AC096861.1-201ENST00000616652 240 ntBASIC6.54□□□□□ -1.36
SIX2Q9NPC8 ADAM5-208ENST00000505455 1998 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 MUC4-215ENST00000475231 16273 ntAPPRIS ALT2 TSL 5 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 PEAK1-202ENST00000558305 4644 ntTSL 4 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 ZNF724-201ENST00000418100 2764 ntAPPRIS P1 TSL 2 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 ZNF19-206ENST00000565100 2087 ntTSL 5 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 MS4A3-201ENST00000278865 1613 ntAPPRIS P1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 LINC02153-202ENST00000522604 1644 ntTSL 2 BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 PDE1C-203ENST00000396184 8852 ntTSL 1 (best) BASIC6.54□□□□□ -1.36
SIX2Q9NPC8 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 C4orf33-202ENST00000425929 1588 ntAPPRIS P1 TSL 2 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 CAPRIN2-202ENST00000395805 4156 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 PDE4D-228ENST00000636120 6659 ntTSL 5 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 SNORA21-201ENST00000362423 132 ntBASIC6.53□□□□□ -1.36
SIX2Q9NPC8 ZCCHC6-202ENST00000375947 611 ntTSL 5 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 RN7SKP146-201ENST00000410242 334 ntBASIC6.53□□□□□ -1.36
SIX2Q9NPC8 RN7SKP144-201ENST00000411108 279 ntBASIC6.53□□□□□ -1.36
SIX2Q9NPC8 AC245096.1-201ENST00000413104 546 ntBASIC6.53□□□□□ -1.36
SIX2Q9NPC8 PSMD10P2-201ENST00000432890 672 ntBASIC6.53□□□□□ -1.36
SIX2Q9NPC8 AL356121.1-201ENST00000442911 156 ntBASIC6.53□□□□□ -1.36
SIX2Q9NPC8 AC092168.1-201ENST00000443030 236 ntTSL 5 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 LARGE-IT1-201ENST00000445391 558 ntTSL 4 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 AC124945.1-201ENST00000485133 188 ntBASIC6.53□□□□□ -1.36
SIX2Q9NPC8 RPL23AP40-201ENST00000487630 390 ntBASIC6.53□□□□□ -1.36
SIX2Q9NPC8 TOMM22P4-201ENST00000511318 336 ntBASIC6.53□□□□□ -1.36
SIX2Q9NPC8 MRPS5P3-201ENST00000515577 166 ntBASIC6.53□□□□□ -1.36
SIX2Q9NPC8 LINC02441-201ENST00000543651 552 ntTSL 4 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 WBP1LP11-201ENST00000586141 328 ntBASIC6.53□□□□□ -1.36
SIX2Q9NPC8 CT45A1-201ENST00000594117 1087 ntAPPRIS P1 TSL 1 (best) BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 Metazoa_SRP.81-201ENST00000618466 316 ntBASIC6.53□□□□□ -1.36
SIX2Q9NPC8 AL357562.1-201ENST00000624911 609 ntBASIC6.53□□□□□ -1.36
SIX2Q9NPC8 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.53□□□□□ -1.36
SIX2Q9NPC8 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.53□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 142 ms