Protein–RNA interactions for Protein: Q9C037

TRIM4, E3 ubiquitin-protein ligase TRIM4, humanhuman

Predictions only

Length 500 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4Q9C037 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 AC127071.2-201ENST00000623293 527 ntBASIC6.46□□□□□ -1.38
TRIM4Q9C037 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM4Q9C037 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 ZNF329-204ENST00000598312 3410 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM4Q9C037 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 CASP10-208ENST00000448480 1603 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
TRIM4Q9C037 AC009831.5-201ENST00000624000 3189 ntBASIC6.46□□□□□ -1.38
TRIM4Q9C037 ADGRE1-203ENST00000381404 3056 ntTSL 2 BASIC6.46□□□□□ -1.38
TRIM4Q9C037 TTI1-203ENST00000449821 3791 ntAPPRIS P1 TSL 2 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM4Q9C037 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM4Q9C037 AL512329.1-201ENST00000404600 1592 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 AC005332.9-201ENST00000620266 2921 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 LINC00922-203ENST00000569736 1760 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM4Q9C037 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM4Q9C037 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM4Q9C037 GMFG-201ENST00000253054 616 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 OR2M1P-201ENST00000318104 951 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 RNU1-59P-201ENST00000364829 162 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 RN7SKP130-201ENST00000364924 301 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 RN7SKP189-201ENST00000365042 330 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 SNORA70.3-201ENST00000365075 132 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 HEATR1-201ENST00000366579 793 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 RGS5-202ENST00000367903 934 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 MATR3-230ENST00000394800 5513 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 Z68694.1-201ENST00000413929 841 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 RPLP1P10-201ENST00000413972 339 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 ZEB2-AS1-203ENST00000428623 436 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 AC008063.2-201ENST00000432251 619 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 AL391987.1-201ENST00000441025 200 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 NPM1P19-201ENST00000450070 712 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 snoU13.29-201ENST00000459370 104 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM4Q9C037 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 AC011352.2-201ENST00000514574 1016 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 AC008705.1-201ENST00000518837 489 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 OR5AP2-201ENST00000544374 1006 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 AL132989.1-201ENST00000557322 576 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 ADAMTS7P4-205ENST00000560651 453 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 AC068418.1-201ENST00000582990 404 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 SIGLECL1-205ENST00000597824 870 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM4Q9C037 AC239809.3-203ENST00000611286 1050 ntTSL 5 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 U1.25-201ENST00000614085 162 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 U1.34-201ENST00000618578 162 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 U1.31-201ENST00000620022 160 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 AL512356.3-201ENST00000623005 461 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 MYOCOS-203ENST00000637303 564 ntAPPRIS P5 TSL 5 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 FBXW12-201ENST00000296438 1647 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM4Q9C037 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 LNPK-212ENST00000544803 7647 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM4Q9C037 AC025470.1-201ENST00000510053 2032 ntBASIC6.45□□□□□ -1.38
TRIM4Q9C037 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM4Q9C037 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.45□□□□□ -1.38
TRIM4Q9C037 USP16-203ENST00000399975 2960 ntAPPRIS ALT1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM4Q9C037 GTPBP10-201ENST00000222511 7531 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
TRIM4Q9C037 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM4Q9C037 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC006213.6-201ENST00000623722 4179 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 FOXP2-203ENST00000378237 2187 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM4Q9C037 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM4Q9C037 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM4Q9C037 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM4Q9C037 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 RPS7-201ENST00000304921 786 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM4Q9C037 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 OR5D16-201ENST00000378396 987 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 DEFB126-201ENST00000382398 655 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC116036.1-201ENST00000412199 367 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 AL713923.1-201ENST00000414071 378 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC244453.3-201ENST00000426275 459 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 RPL12P16-201ENST00000431098 498 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 GTF2IP14-201ENST00000441415 586 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 POU5F1P5-201ENST00000445059 658 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC012123.2-201ENST00000485809 248 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 RN7SL561P-201ENST00000488553 281 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC090058.1-201ENST00000498788 435 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 SNX18P25-201ENST00000510539 758 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC027308.1-201ENST00000517993 110 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 LECT2-205ENST00000522943 574 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC051619.2-201ENST00000559063 397 ntBASIC6.44□□□□□ -1.38
TRIM4Q9C037 AC020914.7-201ENST00000594477 545 ntBASIC6.44□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 104.4 ms