Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL589743.6-201ENST00000611025 117 ntBASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 MIR7159-201ENST00000620587 66 ntBASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 DRG1-207ENST00000629688 309 ntTSL 5 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 SLC2A14-203ENST00000431042 3458 ntAPPRIS ALT2 TSL 1 (best) BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 CACNB4-234ENST00000636785 3787 ntTSL 5 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 RIMS1-205ENST00000414192 1787 ntTSL 2 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 TMEM257-201ENST00000408967 2441 ntAPPRIS P1 BASIC7.46□□□□□ -1.22
UPF3BQ9BZI7 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 SLAMF6-203ENST00000368059 2743 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 NPIPB8-202ENST00000529716 2058 ntAPPRIS P1 TSL 5 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 ZNF675-201ENST00000359788 2301 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 SPATA9-201ENST00000274432 1100 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 SULT1C2-204ENST00000409880 1206 ntTSL 3 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 LINC00463-201ENST00000413501 1147 ntTSL 3 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 DHFRP2-201ENST00000414224 547 ntBASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 MTND4LP17-201ENST00000414607 293 ntBASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 PMCHL1-204ENST00000430902 659 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 GTF3AP6-201ENST00000432585 986 ntBASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 PPIAP20-201ENST00000449839 135 ntBASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 AC095033.1-201ENST00000451611 1096 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 AC073594.1-201ENST00000462065 364 ntBASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 SLC25A51P1-201ENST00000468432 871 ntBASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 GM2AP2-201ENST00000491764 562 ntBASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 MYL2-203ENST00000548438 664 ntTSL 3 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 AC079793.1-201ENST00000553076 713 ntTSL 4 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 SEPT4-AS1-202ENST00000580589 653 ntTSL 3 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 AC005726.4-201ENST00000582858 458 ntBASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 ODF4-202ENST00000584943 804 ntAPPRIS ALT2 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 AC012676.3-201ENST00000614983 479 ntBASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 OR7E91P-202ENST00000642062 1198 ntBASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 AC073365.1-203ENST00000641055 1992 ntBASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 DMD-205ENST00000359836 7339 ntTSL 5 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 PARP8-212ENST00000505697 2747 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 TM9SF4-202ENST00000398022 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 AC007278.1-201ENST00000450893 1327 ntTSL 3 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 AL133243.2-201ENST00000610331 1621 ntBASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 GRIK1-201ENST00000327783 3179 ntTSL 5 BASIC7.45□□□□□ -1.22
UPF3BQ9BZI7 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 TLR10-201ENST00000308973 3958 ntAPPRIS P1 TSL 5 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 SRGAP1-207ENST00000631006 8406 ntTSL 5 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 BPIFA2-201ENST00000253362 1122 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 BPIFA2-202ENST00000354932 1047 ntAPPRIS P1 TSL 1 (best) BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 SMARCE1P6-201ENST00000398372 1216 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 SULT6B1-201ENST00000407963 902 ntTSL 5 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 SLC3A1-203ENST00000409294 792 ntTSL 2 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 OR6R1P-201ENST00000431838 940 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AL354893.1-201ENST00000433735 348 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AL645939.3-201ENST00000435408 225 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AL731544.1-201ENST00000436500 370 ntTSL 5 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AC011625.1-201ENST00000455442 526 ntTSL 4 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AC115223.1-201ENST00000466377 870 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 NDUFB2-210ENST00000475276 539 ntTSL 4 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 RN7SL369P-201ENST00000477138 299 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 RNA5SP116-201ENST00000516132 98 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 RNA5SP206-201ENST00000516703 121 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 RNA5SP400-201ENST00000517155 111 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 TRIM51DP-201ENST00000529746 596 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AC011444.3-201ENST00000588342 325 ntTSL 3 BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AL589765.6-201ENST00000601909 549 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AC011891.2-201ENST00000604949 397 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AC068769.1-201ENST00000474767 2426 ntBASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC7.44□□□□□ -1.22
UPF3BQ9BZI7 AC005225.5-201ENST00000623547 2225 ntBASIC7.44□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms