Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AC068790.2-201ENST00000602601 557 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC138473.1-201ENST00000605717 526 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC079395.3-201ENST00000615161 484 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC010809.3-201ENST00000621310 641 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AL078595.3-201ENST00000623815 1166 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AL596275.2-208ENST00000641192 594 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 LUZP1-203ENST00000418342 8421 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 ARHGEF9-229ENST00000637040 5001 ntTSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 STIL-201ENST00000337817 5087 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 ZNF969P-201ENST00000510345 2341 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 PAX8-AS1-202ENST00000422956 11799 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 AC093536.2-201ENST00000565257 1406 ntBASIC6.93□□□□□ -1.3
CDK5RAP1Q96SZ6 LCP2-201ENST00000046794 4678 ntAPPRIS P2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AMY1B-202ENST00000370080 1787 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 MTCO1P25-201ENST00000414449 1799 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AF064860.2-201ENST00000457325 1542 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC120338.1-201ENST00000625074 1541 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 GCNA-201ENST00000373695 3213 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 CSNK1A1-205ENST00000515435 1856 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 KLHL5-205ENST00000508137 2926 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 CFI-205ENST00000512148 1914 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 STK4-207ENST00000499879 6161 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 CASP10-205ENST00000360132 5814 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 DCSTAMP-201ENST00000297581 1953 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 HYDIN-215ENST00000541601 3058 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 LYZL1-201ENST00000375500 815 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 NOX4-203ENST00000375979 816 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AL133260.1-201ENST00000405720 405 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AL049712.1-201ENST00000418739 872 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC005005.2-201ENST00000420779 380 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 FAM183DP-201ENST00000421987 399 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 NAALADL2-AS1-201ENST00000426315 804 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AL139002.1-201ENST00000435281 902 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC245291.3-201ENST00000443400 292 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 MTND1P33-201ENST00000446251 917 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 CLIC4P1-201ENST00000453177 535 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 RBMY2HP-201ENST00000457961 720 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 TPTE2P5-203ENST00000458118 728 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC108063.1-201ENST00000513586 414 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 SMIM20-202ENST00000514384 774 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AP002498.1-201ENST00000530190 568 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC068339.2-201ENST00000534395 618 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC004217.2-201ENST00000547401 751 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC139697.1-201ENST00000548429 745 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AL049840.5-201ENST00000602827 552 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 PCGEM1-202ENST00000606314 759 ntTSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC015819.1-201ENST00000613588 663 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC005277.2-201ENST00000617898 390 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AL355493.4-201ENST00000618530 292 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AL138955.1-201ENST00000622881 1040 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 AC119674.1-220ENST00000641502 1048 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 CCR2-204ENST00000445132 2386 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 PGK2-201ENST00000304801 1657 ntAPPRIS P1 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 ABCA11P-202ENST00000504019 2110 ntBASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 VTCN1-207ENST00000539893 2719 ntTSL 2 BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 LIPJ-201ENST00000371939 1484 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 ZNF559-212ENST00000592896 1488 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
CDK5RAP1Q96SZ6 TMCO5A-205ENST00000559502 1939 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 ARL17A-202ENST00000336125 3945 ntAPPRIS P4 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 ATP10D-201ENST00000273859 6655 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 LINC01772-201ENST00000457898 3245 ntTSL 2 BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 OR52N5-201ENST00000317093 1034 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 FAM183A-201ENST00000335282 488 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 PCYT1B-201ENST00000356768 1289 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 MT-CO3-201ENST00000362079 784 ntAPPRIS P1 BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 Y_RNA.318-201ENST00000365131 97 ntBASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 SUMO1-205ENST00000409205 534 ntTSL 2 BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 FAM183A-205ENST00000410048 500 ntTSL 3 BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 EMX2OS-201ENST00000412075 1025 ntTSL 2 BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 AC017048.1-201ENST00000412153 495 ntTSL 2 BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 AC092839.1-201ENST00000433475 536 ntTSL 4 BASIC6.91□□□□□ -1.3
CDK5RAP1Q96SZ6 DSCAM-IT1-201ENST00000440363 720 ntTSL 3 BASIC6.91□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 379.4 ms