Protein–RNA interactions for Protein: Q96GC9

VMP1, Vacuole membrane protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1Q96GC9 MRPL35-203ENST00000409180 651 ntAPPRIS ALT1 TSL 3 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 CDC42P6-201ENST00000421246 576 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 AC068888.2-201ENST00000435621 536 ntTSL 3 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 NFIA-AS2-203ENST00000438559 1275 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 CRYGGP-201ENST00000443337 145 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 PFN1P11-201ENST00000445829 389 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 AL121578.2-201ENST00000448797 447 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 AC092164.1-201ENST00000452212 726 ntTSL 2 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 CEACAMP11-201ENST00000455211 583 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 RN7SL37P-201ENST00000490461 307 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 RN7SKP196-201ENST00000516267 345 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 AC020937.1-201ENST00000519677 1013 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 BAALC-AS1-208ENST00000523614 582 ntTSL 5 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 AC090115.2-201ENST00000548060 883 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 DUX4L52-201ENST00000549363 777 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 OR4C49P-201ENST00000563891 900 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 AC092718.2-202ENST00000566390 556 ntTSL 4 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 MDFIC2-201ENST00000567252 778 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 RN7SL270P-201ENST00000579643 281 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 Metazoa_SRP.202-201ENST00000585071 281 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 AC008764.3-201ENST00000597357 432 ntTSL 5 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 MIR6849-201ENST00000618543 69 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 AL158062.1-201ENST00000619632 745 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 KCNA2-209ENST00000639048 10836 ntTSL 5 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 HSPD1P8-201ENST00000400121 1658 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 AC097461.1-201ENST00000568928 2821 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 FBXO3-208ENST00000530401 7410 ntTSL 2 BASIC6.29□□□□□ -1.4
VMP1Q96GC9 AC005480.1-202ENST00000555916 3548 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 ADAM20-201ENST00000256389 2795 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
VMP1Q96GC9 AL022323.4-201ENST00000623980 13120 ntBASIC6.29□□□□□ -1.4
VMP1Q96GC9 PPP1R11-206ENST00000376773 1640 ntTSL 3 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VMP1Q96GC9 ZMAT1-206ENST00000540921 3139 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 GOLT1B-201ENST00000229314 3227 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
VMP1Q96GC9 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 SETDB2-201ENST00000258672 2138 ntTSL 5 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 CENPN-203ENST00000393335 1556 ntTSL 2 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VMP1Q96GC9 STK32A-202ENST00000397936 5393 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 HPS5-205ENST00000438420 4147 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VMP1Q96GC9 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 CCL2-201ENST00000225831 741 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
VMP1Q96GC9 OR5B2-201ENST00000302581 1049 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 OR2M1P-201ENST00000318104 951 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 TAS2R42-201ENST00000334266 945 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 RN7SKP184-201ENST00000362348 333 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 RNU1-5P-201ENST00000362684 144 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 SNORA70.3-201ENST00000365075 132 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 SNORD94-201ENST00000386037 137 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 FDPSP5-201ENST00000399474 1057 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 SNORA79B-201ENST00000410557 148 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 AC245884.2-201ENST00000426257 404 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 AC239367.3-201ENST00000428996 814 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 AC016766.1-201ENST00000429636 714 ntTSL 3 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 GTF2IP14-201ENST00000441415 586 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 AL356121.1-201ENST00000442911 156 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 AL034369.1-201ENST00000453808 477 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 RPS3AP49-201ENST00000472161 790 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 AP003385.3-201ENST00000472498 287 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 GPX6-202ENST00000474923 716 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VMP1Q96GC9 RPL7AP23-201ENST00000482625 776 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 AC114324.2-202ENST00000503812 134 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 AC108941.2-201ENST00000506796 716 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 AC109588.1-201ENST00000507759 726 ntTSL 3 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 CENPK-210ENST00000510354 1124 ntTSL 5 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 AC097494.1-201ENST00000512898 732 ntTSL 3 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 CCNHP1-201ENST00000513311 678 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 AC010834.1-201ENST00000517998 696 ntTSL 2 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
VMP1Q96GC9 AP001831.1-201ENST00000524610 411 ntTSL 3 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 AL137224.1-201ENST00000527984 389 ntTSL 2 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 AC013549.3-201ENST00000528792 419 ntTSL 3 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 RPL27A-210ENST00000531978 867 ntTSL 2 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 AC007068.2-201ENST00000543168 395 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
VMP1Q96GC9 AC005757.1-201ENST00000591432 472 ntTSL 4 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 AL353593.3-201ENST00000602778 764 ntTSL 2 BASIC6.28□□□□□ -1.4
VMP1Q96GC9 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.28□□□□□ -1.4
VMP1Q96GC9 AC073575.2-201ENST00000614212 627 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 83.3 ms