Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 AP001002.1-201ENST00000625148 1513 ntBASIC6.59□□□□□ -1.35
ATG4AQ8WYN0 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC6.59□□□□□ -1.36
ATG4AQ8WYN0 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.36
ATG4AQ8WYN0 TLR7-201ENST00000380659 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 ATF7IP-201ENST00000261168 8878 ntAPPRIS P3 TSL 5 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 XAGE3-201ENST00000346279 497 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 ECHDC1-202ENST00000368289 909 ntTSL 5 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 MRPS6P2-201ENST00000381143 370 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC245036.1-201ENST00000391727 309 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 MGST1-205ENST00000396210 914 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AL355143.1-201ENST00000407101 841 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AL353133.1-201ENST00000407695 401 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC083862.1-201ENST00000427378 1242 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 MTCYBP32-201ENST00000427945 1084 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AL158214.1-201ENST00000444423 404 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 LINC01364-201ENST00000452509 889 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AL022319.1-201ENST00000458183 1167 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 RN7SL372P-201ENST00000461982 298 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 RN7SL655P-201ENST00000486087 298 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC093870.1-201ENST00000506837 213 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC025768.1-201ENST00000510057 267 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC106800.3-201ENST00000511389 308 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 RNU6-415P-201ENST00000516252 97 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 SCARNA11.1-201ENST00000516918 132 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC134349.2-201ENST00000535136 910 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AP000753.2-201ENST00000540307 423 ntTSL 3 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC011462.3-201ENST00000598988 540 ntTSL 3 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 ZNF814-214ENST00000600634 461 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AL391834.2-201ENST00000609982 546 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AP003789.1-201ENST00000617737 605 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC132825.8-201ENST00000640783 297 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 SAMMSON-214ENST00000641395 1264 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AC009220.2-201ENST00000489759 1751 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 WDR35-201ENST00000281405 6918 ntAPPRIS P3 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 IMMTP1-201ENST00000435590 2219 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 AP004289.1-201ENST00000436307 2205 ntBASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC6.58□□□□□ -1.36
ATG4AQ8WYN0 SLC5A12-201ENST00000280467 2269 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 RPL31P11-201ENST00000426558 1558 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC022306.1-201ENST00000560489 1562 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 MTND4P9-201ENST00000507819 1346 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 LRMDA-208ENST00000496424 3923 ntTSL 2 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 SHQ1P1-201ENST00000437111 1544 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 GTF3C3-202ENST00000409364 1736 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 PSMA3-201ENST00000216455 970 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 RNA5SP308-201ENST00000362532 115 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 RNU6-386P-201ENST00000362650 107 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 S100A7-202ENST00000368723 479 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 RNU6-925P-201ENST00000384629 104 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 MRPL32P1-201ENST00000406301 247 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC063965.1-201ENST00000416679 499 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AL020997.1-201ENST00000446554 349 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC009244.1-201ENST00000450566 258 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC092675.1-203ENST00000454230 538 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AKR1D1P1-201ENST00000457236 936 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 SLC25A51P1-201ENST00000468432 871 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC004594.1-201ENST00000482375 463 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 DEFB109A-201ENST00000482450 265 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC025470.2-201ENST00000506106 897 ntTSL 2 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC010634.1-201ENST00000513925 540 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AP000426.1-201ENST00000518749 361 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC087360.1-201ENST00000518788 616 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC025040.1-201ENST00000560375 1284 ntTSL 2 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 STRADA-207ENST00000578008 1153 ntTSL 5 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC090241.1-201ENST00000587732 621 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC007786.1-202ENST00000590607 443 ntTSL 3 BASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 OR7A8P-201ENST00000595427 913 ntBASIC6.57□□□□□ -1.36
ATG4AQ8WYN0 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 209.7 ms