Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 CCNB1IP1P1-201ENST00000428976 839 ntBASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 AC073850.1-201ENST00000449243 255 ntBASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 AC093166.4-201ENST00000457867 318 ntBASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 AC005244.1-201ENST00000582566 339 ntBASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 GMFG-212ENST00000602185 423 ntTSL 3 BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 AL445465.1-206ENST00000609544 528 ntTSL 5 BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 PROX1-203ENST00000435016 3075 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 ANKRD31-201ENST00000274361 6036 ntAPPRIS P2 TSL 5 BASIC9.51□□□□□ -0.89
CFAP43Q8NDM7 ZNF778-207ENST00000620195 11031 ntAPPRIS P3 TSL 2 BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 ZFYVE9-204ENST00000371591 4874 ntAPPRIS P4 TSL 1 (best) BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 AL357568.1-201ENST00000421530 1963 ntTSL 2 BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 A2ML1-201ENST00000299698 5274 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 RAPGEF4-204ENST00000409036 3975 ntTSL 5 BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 GABRR1-203ENST00000454853 2820 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 FCGR1B-209ENST00000616817 1584 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 SLC7A2-203ENST00000470360 7638 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 AL391261.1-201ENST00000555712 1479 ntBASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 KAT6A-203ENST00000406337 9241 ntAPPRIS P3 TSL 5 BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 ZNF410-202ENST00000334521 2193 ntTSL 5 BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 TRGV5-201ENST00000390344 552 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 AK4P4-201ENST00000419465 646 ntBASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 OR4K3-201ENST00000425829 947 ntAPPRIS P1 BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 LINC01789-201ENST00000443123 860 ntTSL 5 BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 OTX2P1-201ENST00000450956 354 ntBASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 AL157777.1-201ENST00000468100 304 ntBASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 OR4A46P-201ENST00000527255 933 ntBASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 LINC02451-201ENST00000546982 565 ntTSL 4 BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 RN7SL544P-201ENST00000617232 284 ntBASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 RN7SL763P-201ENST00000620922 284 ntBASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 SEPT14-201ENST00000388975 3785 ntAPPRIS P1 TSL 2 BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 NCKAP5-203ENST00000405974 3636 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 CYFIP1-208ENST00000617928 6793 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 GOLGB1-201ENST00000340645 11187 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 ABHD2-201ENST00000352732 8735 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 AC024587.1-201ENST00000505925 2157 ntBASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 KCNMB3P1-202ENST00000493696 3389 ntBASIC9.5□□□□□ -0.89
CFAP43Q8NDM7 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 CCDC125-201ENST00000383374 2006 ntTSL 5 BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 C16orf62-202ENST00000417362 3115 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 PTPRT-206ENST00000373198 12746 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 AC117409.1-201ENST00000470499 1310 ntBASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 VWA5A-203ENST00000392748 3419 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 PREPL-203ENST00000378520 2308 ntTSL 5 BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 SSX3-201ENST00000298396 1232 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 PRSS37-201ENST00000350549 1189 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 RNA5SP234-201ENST00000363916 119 ntBASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 IFNB1-201ENST00000380232 859 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 MRPS22-205ENST00000478464 1065 ntTSL 5 BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 NDUFA5P12-201ENST00000503796 343 ntBASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 DUTP7-201ENST00000507982 486 ntBASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 MIR1269B-201ENST00000580405 75 ntBASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 AL691477.1-201ENST00000624398 162 ntBASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 EPPK1-202ENST00000615648 16002 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 AL136531.3-201ENST00000624378 3658 ntBASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 FARP1-219ENST00000596580 13532 ntTSL 5 BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 NOL8-214ENST00000535387 3390 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 SLC1A2-201ENST00000278379 11696 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 PCDH19-201ENST00000255531 7937 ntAPPRIS P3 TSL 1 (best) BASIC9.49□□□□□ -0.89
CFAP43Q8NDM7 MTMR7-201ENST00000180173 3850 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 AC103563.5-201ENST00000455643 364 ntBASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 AC010343.2-201ENST00000510162 224 ntBASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 CU639417.4-201ENST00000623928 207 ntBASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 SLC8A1-AS1-239ENST00000631142 623 ntTSL 5 BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 ATP8B1-201ENST00000283684 5818 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 WDR95P-201ENST00000425638 1542 ntBASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 NUMB-223ENST00000556772 5172 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 RSAD2-201ENST00000382040 3519 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 SUPT6H-201ENST00000314616 6523 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 LINGO2-202ENST00000379992 3044 ntAPPRIS P1 TSL 5 BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 HBG1-201ENST00000330597 808 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 MDGA2-201ENST00000357362 2965 ntTSL 5 BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 LINC02246-202ENST00000418954 717 ntTSL 2 BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 RPS15AP30-201ENST00000420976 390 ntBASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 AL603840.1-203ENST00000424357 645 ntTSL 3 BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 LINC01798-204ENST00000433396 682 ntTSL 3 BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 ELOCP3-201ENST00000439303 348 ntBASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 AC104164.1-201ENST00000460282 590 ntBASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 APPL2-203ENST00000546731 684 ntTSL 2 BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 LINC00871-204ENST00000556886 866 ntTSL 3 BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 AC141002.1-201ENST00000607025 279 ntBASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 SAMMSON-227ENST00000642114 1199 ntBASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 SELE-203ENST00000367775 3389 ntTSL 5 BASIC9.48□□□□□ -0.89
CFAP43Q8NDM7 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC9.47□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 107.5 ms