Protein–RNA interactions for Protein: Q6ZW05

PTCHD4, Patched domain-containing protein 4, humanhuman

Predictions only

Length 846 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4Q6ZW05 VNN3-207ENST00000425515 1761 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTCHD4Q6ZW05 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC6.07□□□□□ -1.44
PTCHD4Q6ZW05 PTBP3-202ENST00000334318 7990 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTCHD4Q6ZW05 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
PTCHD4Q6ZW05 ELOC-205ENST00000520210 1451 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTCHD4Q6ZW05 ASXL2-203ENST00000435504 12878 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
PTCHD4Q6ZW05 HSP90AA2P-201ENST00000530115 2196 ntBASIC6.07□□□□□ -1.44
PTCHD4Q6ZW05 AC062022.1-201ENST00000451026 1684 ntBASIC6.07□□□□□ -1.44
PTCHD4Q6ZW05 PAICS-201ENST00000264221 3339 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTCHD4Q6ZW05 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTCHD4Q6ZW05 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
PTCHD4Q6ZW05 KIAA1328-202ENST00000586135 1863 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
PTCHD4Q6ZW05 PCGF5-204ENST00000543648 7144 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AC009501.3-201ENST00000605001 1352 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 CASC19-238ENST00000641523 1558 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 SLC12A6-218ENST00000560611 4239 ntAPPRIS ALT1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 SAMMSON-210ENST00000641260 1308 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 ZNF101P1-201ENST00000435701 1720 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 SCN1A-217ENST00000637988 8562 ntAPPRIS P3 TSL 5 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 OR1I1-201ENST00000209540 1242 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 PAGE4-201ENST00000218068 499 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 SNORD115-48-201ENST00000364764 76 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 SNORA70.3-201ENST00000365075 132 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 OR10A4-201ENST00000379829 995 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 IGKV3D-11-201ENST00000390277 444 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 TRAV12-3-201ENST00000390442 399 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 OR2H1-204ENST00000396792 1294 ntAPPRIS P1 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 S100B-203ENST00000397648 839 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AC084816.1-201ENST00000413794 565 ntTSL 4 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AL583805.2-201ENST00000418571 486 ntTSL 5 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AL590432.1-201ENST00000420071 566 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 MARK2P12-201ENST00000420129 585 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AL359633.1-201ENST00000421403 310 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AC106053.1-201ENST00000431697 368 ntTSL 3 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AP001048.1-201ENST00000436359 280 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 Z80107.1-201ENST00000436830 412 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 XKRY2-201ENST00000442362 1093 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 MIR4422HG-201ENST00000451250 638 ntTSL 3 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 RPS3AP53-201ENST00000454716 778 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AP002345.1-201ENST00000456493 928 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AL022319.1-201ENST00000458183 1167 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AL356364.1-201ENST00000458443 182 ntTSL 3 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 RPS26P11-201ENST00000463445 348 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AC099328.2-201ENST00000465347 455 ntTSL 3 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 RPL5P15-201ENST00000475870 897 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 PPP1R2P6-201ENST00000478565 588 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AC010609.1-201ENST00000519375 569 ntTSL 3 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AC023632.5-201ENST00000521010 491 ntTSL 3 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 IGHV1-14-201ENST00000523391 241 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AC011410.1-201ENST00000524175 705 ntTSL 5 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AP001804.1-201ENST00000526868 919 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AP005639.1-201ENST00000526939 192 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AP003031.2-202ENST00000533590 572 ntTSL 4 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AL355102.4-201ENST00000553638 738 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AC016839.1-201ENST00000578162 867 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AP006587.6-201ENST00000582128 1091 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AC011120.1-201ENST00000583916 624 ntTSL 5 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AC011921.2-201ENST00000589465 152 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AL356056.3-201ENST00000605984 551 ntTSL 3 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AL356752.1-201ENST00000615844 593 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AC079298.2-201ENST00000623885 459 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AC007683.2-201ENST00000624681 714 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AL353747.4-202ENST00000625787 674 ntTSL 3 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 RBMS3-AS3-202ENST00000635847 738 ntTSL 5 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 EIF4E-203ENST00000450253 11523 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AC068769.1-201ENST00000474767 2426 ntBASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 BLOC1S2-205ENST00000614731 2634 ntTSL 2 BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 AASDH-203ENST00000502617 3004 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
PTCHD4Q6ZW05 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 ZCCHC8-201ENST00000536306 2904 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 ANKRD12-203ENST00000400020 9115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 RFX3-212ENST00000617270 9253 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 ZNF600-201ENST00000338230 3829 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 KIAA0391-203ENST00000534898 2611 ntAPPRIS P3 TSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 ZNF131-201ENST00000306938 2400 ntAPPRIS P1 TSL 2 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 HSPD1P8-201ENST00000400121 1658 ntBASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 FCHSD2-208ENST00000458644 2215 ntTSL 2 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 OR8A1-201ENST00000284287 1146 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
PTCHD4Q6ZW05 SPAG11B-201ENST00000297498 795 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 101.8 ms