Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
CDH6P55285 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.45□□□□□ -1.38
CDH6P55285 MT1CP-201ENST00000567054 174 ntBASIC6.45□□□□□ -1.38
CDH6P55285 AC090651.1-201ENST00000567865 634 ntBASIC6.45□□□□□ -1.38
CDH6P55285 OR7A8P-201ENST00000595427 913 ntBASIC6.45□□□□□ -1.38
CDH6P55285 AL591167.1-201ENST00000607321 456 ntBASIC6.45□□□□□ -1.38
CDH6P55285 AC022106.1-201ENST00000612834 766 ntBASIC6.45□□□□□ -1.38
CDH6P55285 MIR6813-201ENST00000621638 56 ntBASIC6.45□□□□□ -1.38
CDH6P55285 MIR6823-201ENST00000622118 61 ntBASIC6.45□□□□□ -1.38
CDH6P55285 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC6.45□□□□□ -1.38
CDH6P55285 AC099654.15-201ENST00000639802 509 ntBASIC6.45□□□□□ -1.38
CDH6P55285 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC6.45□□□□□ -1.38
CDH6P55285 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.45□□□□□ -1.38
CDH6P55285 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC6.45□□□□□ -1.38
CDH6P55285 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.45□□□□□ -1.38
CDH6P55285 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 ASNS-209ENST00000444334 1812 ntTSL 2 BASIC6.45□□□□□ -1.38
CDH6P55285 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 DNAH3-201ENST00000261383 12394 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
CDH6P55285 BEND2-201ENST00000380030 1938 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH6P55285 MID1-206ENST00000380787 5973 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH6P55285 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.44□□□□□ -1.38
CDH6P55285 SLFN14-201ENST00000415846 2889 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH6P55285 AP001157.1-201ENST00000550837 2339 ntBASIC6.44□□□□□ -1.38
CDH6P55285 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.44□□□□□ -1.38
CDH6P55285 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.44□□□□□ -1.38
CDH6P55285 AL031656.1-202ENST00000457704 1995 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH6P55285 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH6P55285 PHC3-203ENST00000467570 2595 ntTSL 2 BASIC6.44□□□□□ -1.38
CDH6P55285 WASHC4-214ENST00000620430 5807 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH6P55285 TMED10-201ENST00000303575 4127 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH6P55285 FLRT3-201ENST00000341420 3971 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
CDH6P55285 TMEM202-201ENST00000341689 1012 ntAPPRIS P2 TSL 5 BASIC6.44□□□□□ -1.38
CDH6P55285 SCGB1D4-201ENST00000358585 439 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH6P55285 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH6P55285 PPARG-204ENST00000397000 1122 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH6P55285 LINC01372-201ENST00000430244 489 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH6P55285 AC094019.1-201ENST00000434678 472 ntBASIC6.44□□□□□ -1.38
CDH6P55285 MRPS21P3-201ENST00000436696 262 ntBASIC6.44□□□□□ -1.38
CDH6P55285 GAPDHP23-201ENST00000444823 993 ntBASIC6.44□□□□□ -1.38
CDH6P55285 AL451063.1-201ENST00000450164 1133 ntBASIC6.44□□□□□ -1.38
CDH6P55285 RPL7L1P3-201ENST00000455249 689 ntBASIC6.44□□□□□ -1.38
CDH6P55285 AC002075.1-201ENST00000457396 676 ntBASIC6.44□□□□□ -1.38
CDH6P55285 RN7SL104P-201ENST00000498686 293 ntBASIC6.44□□□□□ -1.38
CDH6P55285 SNX18P24-201ENST00000505249 671 ntBASIC6.44□□□□□ -1.38
CDH6P55285 Y_RNA.710-201ENST00000516975 110 ntBASIC6.44□□□□□ -1.38
CDH6P55285 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH6P55285 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH6P55285 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH6P55285 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH6P55285 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH6P55285 AC027334.1-201ENST00000603257 310 ntBASIC6.44□□□□□ -1.38
CDH6P55285 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC6.44□□□□□ -1.38
CDH6P55285 Metazoa_SRP.172-201ENST00000621807 265 ntBASIC6.44□□□□□ -1.38
CDH6P55285 SUPT3H-206ENST00000637763 498 ntTSL 3 BASIC6.44□□□□□ -1.38
CDH6P55285 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH6P55285 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH6P55285 ZFP42-201ENST00000326866 2651 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH6P55285 TRPM6-202ENST00000360774 8425 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
CDH6P55285 LRRN3-201ENST00000308478 3099 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH6P55285 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
CDH6P55285 AL662795.2-201ENST00000624252 3706 ntBASIC6.44□□□□□ -1.38
CDH6P55285 LINC00326-202ENST00000457339 2515 ntTSL 5 BASIC6.44□□□□□ -1.38
CDH6P55285 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
CDH6P55285 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.44□□□□□ -1.38
CDH6P55285 OFD1P17-201ENST00000437639 3018 ntBASIC6.44□□□□□ -1.38
CDH6P55285 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
CDH6P55285 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC6.43□□□□□ -1.38
CDH6P55285 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH6P55285 TRPC4-207ENST00000426868 2709 ntTSL 2 BASIC6.43□□□□□ -1.38
CDH6P55285 AL121768.1-201ENST00000613917 2544 ntBASIC6.43□□□□□ -1.38
CDH6P55285 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH6P55285 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH6P55285 GABRA3-204ENST00000535043 1697 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH6P55285 DNHD1-201ENST00000254579 14862 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
CDH6P55285 NOVA1-206ENST00000539517 3912 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH6P55285 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
CDH6P55285 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH6P55285 C14orf105-201ENST00000216445 3082 ntAPPRIS P3 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH6P55285 AC005725.1-201ENST00000577346 2607 ntBASIC6.43□□□□□ -1.38
CDH6P55285 AL359091.1-201ENST00000449048 1734 ntBASIC6.43□□□□□ -1.38
CDH6P55285 CD52-201ENST00000374213 468 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
CDH6P55285 AL451046.1-201ENST00000406097 534 ntBASIC6.43□□□□□ -1.38
CDH6P55285 RN7SKP151-201ENST00000410230 316 ntBASIC6.43□□□□□ -1.38
CDH6P55285 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC6.43□□□□□ -1.38
CDH6P55285 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH6P55285 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC6.43□□□□□ -1.38
CDH6P55285 LINC00328-2P-201ENST00000436585 219 ntBASIC6.43□□□□□ -1.38
CDH6P55285 CENPK-211ENST00000510693 1040 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH6P55285 AP001804.1-201ENST00000526868 919 ntBASIC6.43□□□□□ -1.38
CDH6P55285 OR6M2P-201ENST00000529831 871 ntBASIC6.43□□□□□ -1.38
CDH6P55285 AC007494.1-201ENST00000562293 760 ntBASIC6.43□□□□□ -1.38
CDH6P55285 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC6.43□□□□□ -1.38
CDH6P55285 ANKRD20A5P-203ENST00000580200 566 ntTSL 5 BASIC6.43□□□□□ -1.38
CDH6P55285 AC020916.2-201ENST00000591242 360 ntBASIC6.43□□□□□ -1.38
CDH6P55285 AC004921.1-201ENST00000608884 733 ntTSL 5 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 63.7 ms