Protein–RNA interactions for Protein: P43699

NKX2-1, Homeobox protein Nkx-2.1, humanhuman

Predicted RBP Predictions only

Length 371 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1P43699 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-1P43699 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-1P43699 HIST1H1T-201ENST00000338379 718 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
NKX2-1P43699 NOX1-203ENST00000372964 661 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-1P43699 RAB5CP1-201ENST00000395972 580 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 AL359694.1-201ENST00000403247 604 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC5.23□□□□□ -1.57
NKX2-1P43699 LINC01505-201ENST00000411451 686 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX2-1P43699 AC019130.1-201ENST00000413841 391 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-1P43699 MYB-206ENST00000420123 1051 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-1P43699 ARAFP1-201ENST00000422172 605 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 SETP9-201ENST00000423837 832 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 LINC00266-1-202ENST00000425473 629 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-1P43699 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-1P43699 MIR181A1HG-202ENST00000432296 930 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX2-1P43699 ATP5LP4-201ENST00000434169 307 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 SNRPBP1-201ENST00000443634 282 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 AP001469.2-201ENST00000444966 390 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-1P43699 AL354994.1-201ENST00000445967 194 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-1P43699 PARD3-AS1-201ENST00000446211 302 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-1P43699 OSBPL10-AS1-206ENST00000447181 575 ntTSL 4 BASIC5.23□□□□□ -1.57
NKX2-1P43699 RPL26P30-201ENST00000453533 435 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 AC013727.1-202ENST00000455716 580 ntTSL 4 BASIC5.23□□□□□ -1.57
NKX2-1P43699 AC236972.4-201ENST00000458091 963 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 snoU13.29-201ENST00000459370 104 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 AC022206.1-201ENST00000495947 347 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 LINC01091-201ENST00000508111 645 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-1P43699 SEC11B-201ENST00000518383 499 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX2-1P43699 TBCA-209ENST00000522370 435 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX2-1P43699 AC090993.1-201ENST00000522460 582 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX2-1P43699 AC079089.1-203ENST00000533300 431 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-1P43699 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX2-1P43699 LINC02413-201ENST00000549914 723 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-1P43699 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
NKX2-1P43699 MIR4685-201ENST00000578185 69 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 AC005323.1-203ENST00000585303 566 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-1P43699 AC009950.1-209ENST00000595586 777 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-1P43699 AC040170.1-201ENST00000602425 564 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-1P43699 AC092960.1-201ENST00000604762 351 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 AL021368.3-201ENST00000607119 578 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 AL023583.1-201ENST00000607518 1143 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 AC008833.1-201ENST00000611633 691 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 PTCHD3P1-201ENST00000612350 537 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-1P43699 AC018558.4-201ENST00000622153 281 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 RPS27L-208ENST00000635699 693 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-1P43699 AC116667.2-201ENST00000641075 823 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 AC007255.1-201ENST00000450540 1376 ntTSL 3 BASIC5.23□□□□□ -1.57
NKX2-1P43699 Z95114.1-201ENST00000624264 14574 ntBASIC5.23□□□□□ -1.57
NKX2-1P43699 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
NKX2-1P43699 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-1P43699 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC5.23□□□□□ -1.57
NKX2-1P43699 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-1P43699 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-1P43699 STK3-216ENST00000523601 3107 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-1P43699 CBX5-201ENST00000209875 11528 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
NKX2-1P43699 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
NKX2-1P43699 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-1P43699 GRIK2-203ENST00000369134 4185 ntTSL 5 BASIC5.23□□□□□ -1.57
NKX2-1P43699 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.23□□□□□ -1.57
NKX2-1P43699 AC092692.1-201ENST00000623625 2595 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-1P43699 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-1P43699 RAPH1-204ENST00000418114 1794 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
NKX2-1P43699 RAPH1-205ENST00000419464 1779 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
NKX2-1P43699 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-1P43699 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
NKX2-1P43699 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC5.22□□□□□ -1.57
NKX2-1P43699 AC024341.1-201ENST00000526444 1552 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-1P43699 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NKX2-1P43699 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-1P43699 HMMR-202ENST00000358715 2988 ntAPPRIS P4 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-1P43699 NCR2-201ENST00000373083 1154 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-1P43699 TRAV38-1-201ENST00000390464 353 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NKX2-1P43699 RNA5SP35-201ENST00000391257 129 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 CXADRP1-201ENST00000398098 1095 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AL589655.1-201ENST00000405398 482 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AC003975.1-201ENST00000411856 837 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-1P43699 RPL12P10-201ENST00000413498 498 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AL035604.1-201ENST00000416481 531 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-1P43699 AL359092.1-201ENST00000417156 265 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 KCND3-AS1-201ENST00000419258 383 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-1P43699 AC013470.3-201ENST00000420252 1194 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
NKX2-1P43699 RPL23AP85-201ENST00000421838 433 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 GRPEL2P2-201ENST00000421856 670 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AC104076.1-201ENST00000428080 265 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-1P43699 SLC25A24P1-202ENST00000434803 1220 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AC092967.1-201ENST00000449016 481 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 LINC01839-201ENST00000451348 727 ntTSL 3 BASIC5.22□□□□□ -1.57
NKX2-1P43699 AC008080.2-201ENST00000455149 577 ntTSL 4 BASIC5.22□□□□□ -1.57
NKX2-1P43699 OR7E7P-201ENST00000455678 1012 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 AL357143.1-201ENST00000457239 934 ntTSL 5 BASIC5.22□□□□□ -1.57
NKX2-1P43699 RN7SL492P-201ENST00000460700 295 ntBASIC5.22□□□□□ -1.57
NKX2-1P43699 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-1P43699 NADK2-AS1-201ENST00000501794 720 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
NKX2-1P43699 AC113383.1-205ENST00000502253 792 ntTSL 2 BASIC5.22□□□□□ -1.57
NKX2-1P43699 AC106800.3-201ENST00000511389 308 ntBASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 67.9 ms