Protein–RNA interactions for Protein: P43378

PTPN9, Tyrosine-protein phosphatase non-receptor type 9, humanhuman

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9P43378 ARGFXP2-201ENST00000579304 949 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC6.59□□□□□ -1.35
PTPN9P43378 AC004917.1-204ENST00000592441 701 ntTSL 2 BASIC6.59□□□□□ -1.35
PTPN9P43378 AC005520.3-201ENST00000602874 370 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 AC005229.3-201ENST00000603438 323 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 AC011891.2-201ENST00000604949 397 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 AC015819.1-201ENST00000613588 663 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.59□□□□□ -1.35
PTPN9P43378 MIR6811-201ENST00000620409 58 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC6.59□□□□□ -1.35
PTPN9P43378 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.59□□□□□ -1.35
PTPN9P43378 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC6.59□□□□□ -1.35
PTPN9P43378 MAPK10-261ENST00000641050 3109 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC6.59□□□□□ -1.35
PTPN9P43378 LINC01613-201ENST00000561476 2780 ntBASIC6.59□□□□□ -1.35
PTPN9P43378 AFF2-203ENST00000370457 3952 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PTPN9P43378 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.59□□□□□ -1.35
PTPN9P43378 TTC41P-205ENST00000551270 3963 ntBASIC6.59□□□□□ -1.36
PTPN9P43378 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.58□□□□□ -1.36
PTPN9P43378 GBP1-201ENST00000370473 3035 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN9P43378 EEF1A1P9-201ENST00000514975 1383 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 SLC1A2-202ENST00000395750 11538 ntAPPRIS ALT1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN9P43378 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC6.58□□□□□ -1.36
PTPN9P43378 CASC19-246ENST00000641625 1606 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 GCSAML-202ENST00000366489 4030 ntAPPRIS ALT2 TSL 2 BASIC6.58□□□□□ -1.36
PTPN9P43378 RUNX1T1-234ENST00000521553 1346 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN9P43378 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN9P43378 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN9P43378 AC022826.2-201ENST00000358757 776 ntAPPRIS P1 TSL 4 BASIC6.58□□□□□ -1.36
PTPN9P43378 RNA5SP77-201ENST00000365394 120 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 AC083799.1-201ENST00000366451 910 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.58□□□□□ -1.36
PTPN9P43378 ZNF92P1Y-201ENST00000415010 1191 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 TRGV7-201ENST00000427089 353 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 AC112492.2-201ENST00000432774 1030 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 LINC01449-201ENST00000440213 1220 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN9P43378 SOCS5P1-201ENST00000440415 949 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC6.58□□□□□ -1.36
PTPN9P43378 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC6.58□□□□□ -1.36
PTPN9P43378 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC6.58□□□□□ -1.36
PTPN9P43378 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN9P43378 AC103563.5-201ENST00000455643 364 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 AC018450.1-202ENST00000465880 529 ntTSL 4 BASIC6.58□□□□□ -1.36
PTPN9P43378 AC113398.2-201ENST00000507630 558 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.58□□□□□ -1.36
PTPN9P43378 AC018442.2-201ENST00000523658 648 ntTSL 3 BASIC6.58□□□□□ -1.36
PTPN9P43378 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN9P43378 SNRPGP1-201ENST00000553864 222 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 AC104151.1-201ENST00000563764 323 ntAPPRIS P1 TSL 3 BASIC6.58□□□□□ -1.36
PTPN9P43378 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.58□□□□□ -1.36
PTPN9P43378 AC005692.2-201ENST00000566521 596 ntTSL 3 BASIC6.58□□□□□ -1.36
PTPN9P43378 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN9P43378 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN9P43378 AC005479.3-201ENST00000602790 431 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN9P43378 AC006924.1-201ENST00000610750 559 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 HTR1DP1-201ENST00000616500 888 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 MIR6823-201ENST00000622118 61 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 LINC01676-209ENST00000623043 896 ntTSL 4 BASIC6.58□□□□□ -1.36
PTPN9P43378 LINC01002-237ENST00000634025 555 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN9P43378 AC007603.3-201ENST00000636915 979 ntBASIC6.58□□□□□ -1.36
PTPN9P43378 MCM10-201ENST00000378694 4587 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN9P43378 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN9P43378 AKAP7-201ENST00000263050 2238 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN9P43378 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.58□□□□□ -1.36
PTPN9P43378 DMD-202ENST00000343523 5623 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN9P43378 SLC9A6-212ENST00000637195 4858 ntTSL 5 BASIC6.58□□□□□ -1.36
PTPN9P43378 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 MTCO1P22-201ENST00000604619 1360 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.57□□□□□ -1.36
PTPN9P43378 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN9P43378 OLMALINC-203ENST00000641087 3779 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 OR4G1P-202ENST00000641173 1788 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
PTPN9P43378 NEDD9-202ENST00000379446 4536 ntAPPRIS P3 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN9P43378 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN9P43378 OR8K1-201ENST00000279783 1087 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PTPN9P43378 OR11H13P-201ENST00000359695 979 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 RN7SKP184-201ENST00000362348 333 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN9P43378 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC6.57□□□□□ -1.36
PTPN9P43378 GNAT3-201ENST00000398291 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN9P43378 AL157702.1-201ENST00000398764 426 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 ATF2-205ENST00000409499 801 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
PTPN9P43378 MTND4LP17-201ENST00000414607 293 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 MTND2P12-201ENST00000417560 1252 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 AC010967.1-201ENST00000421575 489 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN9P43378 OSTCP4-201ENST00000424397 449 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 RPS7P14-201ENST00000426405 583 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.57□□□□□ -1.36
PTPN9P43378 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.57□□□□□ -1.36
PTPN9P43378 POU5F1P5-201ENST00000445059 658 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 RPS27AP3-201ENST00000453803 454 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC6.57□□□□□ -1.36
PTPN9P43378 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC6.57□□□□□ -1.36
PTPN9P43378 AC002075.1-201ENST00000457396 676 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 RN7SL221P-201ENST00000466190 281 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC6.57□□□□□ -1.36
PTPN9P43378 RN7SL612P-201ENST00000497704 295 ntBASIC6.57□□□□□ -1.36
PTPN9P43378 LINC01596-201ENST00000503609 592 ntTSL 2 BASIC6.57□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 69.9 ms