Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 AC007991.4-201ENST00000522970 605 ntTSL 3 BASIC6.77□□□□□ -1.33
SSR1P43307 AP004607.5-201ENST00000532034 217 ntBASIC6.77□□□□□ -1.33
SSR1P43307 AC020611.2-201ENST00000535594 671 ntTSL 3 BASIC6.77□□□□□ -1.33
SSR1P43307 SLC25A51P2-201ENST00000535708 889 ntBASIC6.77□□□□□ -1.33
SSR1P43307 AC117373.1-201ENST00000544036 392 ntTSL 3 BASIC6.77□□□□□ -1.33
SSR1P43307 AC073916.1-201ENST00000545095 130 ntBASIC6.77□□□□□ -1.33
SSR1P43307 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC6.77□□□□□ -1.33
SSR1P43307 AC005519.1-201ENST00000554490 601 ntBASIC6.77□□□□□ -1.33
SSR1P43307 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.77□□□□□ -1.33
SSR1P43307 AC092718.4-201ENST00000566639 716 ntBASIC6.77□□□□□ -1.33
SSR1P43307 PWRN1-210ENST00000568045 1299 ntTSL 2 BASIC6.77□□□□□ -1.33
SSR1P43307 AC126323.5-201ENST00000569913 592 ntTSL 3 BASIC6.77□□□□□ -1.33
SSR1P43307 PPIAP14-201ENST00000577627 496 ntBASIC6.77□□□□□ -1.33
SSR1P43307 TVP23B-209ENST00000581733 1258 ntTSL 5 BASIC6.77□□□□□ -1.33
SSR1P43307 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.77□□□□□ -1.33
SSR1P43307 AC019257.2-201ENST00000605539 497 ntBASIC6.77□□□□□ -1.33
SSR1P43307 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SSR1P43307 AMYH02020865.1-207ENST00000617096 458 ntTSL 3 BASIC6.77□□□□□ -1.33
SSR1P43307 MIR6085-201ENST00000618314 110 ntBASIC6.77□□□□□ -1.33
SSR1P43307 RAB28P4-201ENST00000622233 665 ntBASIC6.77□□□□□ -1.33
SSR1P43307 TTN-AS1-268ENST00000629094 604 ntTSL 5 BASIC6.77□□□□□ -1.33
SSR1P43307 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
SSR1P43307 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC6.77□□□□□ -1.33
SSR1P43307 CHD6-202ENST00000373222 2477 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SSR1P43307 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SSR1P43307 FANCD2-205ENST00000431693 2450 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SSR1P43307 AC020656.2-201ENST00000613291 5309 ntBASIC6.77□□□□□ -1.33
SSR1P43307 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
SSR1P43307 FYB1-204ENST00000505428 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.77□□□□□ -1.33
SSR1P43307 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.77□□□□□ -1.33
SSR1P43307 AC006511.3-201ENST00000624929 1783 ntBASIC6.77□□□□□ -1.33
SSR1P43307 LNX2-201ENST00000316334 4627 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
SSR1P43307 EEF1A1P12-201ENST00000443590 1346 ntBASIC6.76□□□□□ -1.33
SSR1P43307 AC144833.1-201ENST00000567953 4089 ntBASIC6.76□□□□□ -1.33
SSR1P43307 POLR2B-213ENST00000639658 3300 ntTSL 5 BASIC6.76□□□□□ -1.33
SSR1P43307 LINC01931-201ENST00000295052 1832 ntTSL 2 BASIC6.76□□□□□ -1.33
SSR1P43307 IPCEF1-203ENST00000422970 3267 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
SSR1P43307 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC6.76□□□□□ -1.33
SSR1P43307 AC009804.2-201ENST00000637566 3032 ntTSL 5 BASIC6.76□□□□□ -1.33
SSR1P43307 MRPL47-201ENST00000259038 1126 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SSR1P43307 OR7A2P-201ENST00000304105 930 ntBASIC6.76□□□□□ -1.33
SSR1P43307 RNA5SP308-201ENST00000362532 115 ntBASIC6.76□□□□□ -1.33
SSR1P43307 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.76□□□□□ -1.33
SSR1P43307 MIR431-201ENST00000385266 114 ntBASIC6.76□□□□□ -1.33
SSR1P43307 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.76□□□□□ -1.33
SSR1P43307 TRGV5P-201ENST00000419915 354 ntBASIC6.76□□□□□ -1.33
SSR1P43307 CDC42P6-201ENST00000421246 576 ntBASIC6.76□□□□□ -1.33
SSR1P43307 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.76□□□□□ -1.33
SSR1P43307 AC007568.1-201ENST00000422912 471 ntBASIC6.76□□□□□ -1.33
SSR1P43307 AL589794.1-201ENST00000424971 390 ntBASIC6.76□□□□□ -1.33
SSR1P43307 AC092106.2-201ENST00000436597 487 ntBASIC6.76□□□□□ -1.33
SSR1P43307 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC6.76□□□□□ -1.33
SSR1P43307 CCNJP1-201ENST00000450600 1149 ntBASIC6.76□□□□□ -1.33
SSR1P43307 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC6.76□□□□□ -1.33
SSR1P43307 RN7SL655P-201ENST00000486087 298 ntBASIC6.76□□□□□ -1.33
SSR1P43307 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.76□□□□□ -1.33
SSR1P43307 SCARNA5-201ENST00000516201 276 ntBASIC6.76□□□□□ -1.33
SSR1P43307 AC008794.1-201ENST00000593063 560 ntTSL 4 BASIC6.76□□□□□ -1.33
SSR1P43307 AL078624.2-201ENST00000605063 554 ntBASIC6.76□□□□□ -1.33
SSR1P43307 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.76□□□□□ -1.33
SSR1P43307 AC007671.1-201ENST00000616957 830 ntBASIC6.76□□□□□ -1.33
SSR1P43307 AC007204.1-201ENST00000621794 555 ntBASIC6.76□□□□□ -1.33
SSR1P43307 TCP11X1-202ENST00000622971 1372 ntBASIC6.76□□□□□ -1.33
SSR1P43307 AC022306.1-201ENST00000560489 1562 ntBASIC6.76□□□□□ -1.33
SSR1P43307 BABAM2-206ENST00000379632 1752 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SSR1P43307 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
SSR1P43307 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC6.76□□□□□ -1.33
SSR1P43307 CHMP1B2P-202ENST00000614414 6813 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SSR1P43307 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC6.76□□□□□ -1.33
SSR1P43307 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.76□□□□□ -1.33
SSR1P43307 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SSR1P43307 ZNF283-203ENST00000588797 2428 ntTSL 2 BASIC6.76□□□□□ -1.33
SSR1P43307 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
SSR1P43307 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC6.76□□□□□ -1.33
SSR1P43307 MMAA-205ENST00000541599 1437 ntTSL 5 BASIC6.76□□□□□ -1.33
SSR1P43307 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC6.76□□□□□ -1.33
SSR1P43307 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.76□□□□□ -1.33
SSR1P43307 ATP2C1-203ENST00000422190 3386 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSR1P43307 ZNF184-202ENST00000377419 2899 ntAPPRIS P1 TSL 4 BASIC6.75□□□□□ -1.33
SSR1P43307 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.75□□□□□ -1.33
SSR1P43307 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSR1P43307 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC6.75□□□□□ -1.33
SSR1P43307 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC6.75□□□□□ -1.33
SSR1P43307 AC019072.1-201ENST00000604535 1551 ntBASIC6.75□□□□□ -1.33
SSR1P43307 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC6.75□□□□□ -1.33
SSR1P43307 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC6.75□□□□□ -1.33
SSR1P43307 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSR1P43307 SEC61G-201ENST00000352861 462 ntAPPRIS P1 TSL 1 (best) BASIC6.75□□□□□ -1.33
SSR1P43307 RNA5SP478-201ENST00000364657 115 ntBASIC6.75□□□□□ -1.33
SSR1P43307 AC092634.1-201ENST00000366505 199 ntBASIC6.75□□□□□ -1.33
SSR1P43307 IGKC-201ENST00000390237 523 ntAPPRIS P1 BASIC6.75□□□□□ -1.33
SSR1P43307 AC019178.1-201ENST00000392337 440 ntBASIC6.75□□□□□ -1.33
SSR1P43307 RPL12P23-201ENST00000405880 490 ntBASIC6.75□□□□□ -1.33
SSR1P43307 AL353133.1-201ENST00000407695 401 ntBASIC6.75□□□□□ -1.33
SSR1P43307 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
SSR1P43307 RNA5SP155-201ENST00000411154 129 ntBASIC6.75□□□□□ -1.33
SSR1P43307 RPL23AP85-201ENST00000421838 433 ntBASIC6.75□□□□□ -1.33
SSR1P43307 AC106874.1-201ENST00000440495 646 ntTSL 3 BASIC6.75□□□□□ -1.33
SSR1P43307 AC092941.2-201ENST00000444379 1008 ntTSL 3 BASIC6.75□□□□□ -1.33
SSR1P43307 LRRC28-203ENST00000447360 1235 ntTSL 1 (best) BASIC6.75□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 75.5 ms