Protein–RNA interactions for Protein: P41235

HNF4A, Hepatocyte nuclear factor 4-alpha, humanhuman

Predictions only

Length 474 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4AP41235 AC027279.1-201ENST00000568885 4284 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 OR56A4-201ENST00000330728 1209 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HNF4AP41235 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.23□□□□□ -1.41
HNF4AP41235 AP003170.5-201ENST00000397185 335 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.23□□□□□ -1.41
HNF4AP41235 UBTFL2-201ENST00000411859 1191 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 CDY17P-201ENST00000414121 1282 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 GSTM2-205ENST00000414179 982 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HNF4AP41235 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HNF4AP41235 AC234781.4-201ENST00000419384 244 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 AL606534.4-201ENST00000427176 792 ntTSL 5 BASIC6.23□□□□□ -1.41
HNF4AP41235 CDY8P-201ENST00000428380 1279 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC6.23□□□□□ -1.41
HNF4AP41235 AL161793.1-201ENST00000435021 445 ntTSL 3 BASIC6.23□□□□□ -1.41
HNF4AP41235 COL11A2P1-205ENST00000441798 676 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 AC016908.1-201ENST00000442571 1219 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 AL031681.1-201ENST00000443304 400 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 CDY20P-201ENST00000447528 1279 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.23□□□□□ -1.41
HNF4AP41235 AC092925.1-201ENST00000470739 493 ntTSL 3 BASIC6.23□□□□□ -1.41
HNF4AP41235 DEFB109A-201ENST00000482450 265 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 GLRX-203ENST00000505427 632 ntAPPRIS P1 TSL 2 BASIC6.23□□□□□ -1.41
HNF4AP41235 THAP6-212ENST00000508105 1103 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HNF4AP41235 AC106800.3-201ENST00000511389 308 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 AC093599.1-201ENST00000515232 562 ntTSL 4 BASIC6.23□□□□□ -1.41
HNF4AP41235 SNORA81.2-201ENST00000516868 170 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 AL133163.3-201ENST00000556448 504 ntTSL 5 BASIC6.23□□□□□ -1.41
HNF4AP41235 SRP14-AS1-203ENST00000560341 669 ntTSL 2 BASIC6.23□□□□□ -1.41
HNF4AP41235 AC016839.1-201ENST00000578162 867 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 MIR212-201ENST00000586026 110 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 AC004805.3-201ENST00000603178 310 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 ARF4-AS1-203ENST00000607782 552 ntTSL 3 BASIC6.23□□□□□ -1.41
HNF4AP41235 MUC1-221ENST00000610359 1101 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HNF4AP41235 MUC1-227ENST00000615517 951 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HNF4AP41235 AL138693.1-201ENST00000622219 129 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 AC068213.1-201ENST00000625124 226 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 PSMD10P2-203ENST00000627340 914 ntTSL 5 BASIC6.23□□□□□ -1.41
HNF4AP41235 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.23□□□□□ -1.41
HNF4AP41235 AC011346.1-204ENST00000638089 1210 ntAPPRIS P5 TSL 3 BASIC6.23□□□□□ -1.41
HNF4AP41235 OR56A4-203ENST00000641279 1209 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HNF4AP41235 STAU2-210ENST00000521210 1950 ntTSL 2 BASIC6.23□□□□□ -1.41
HNF4AP41235 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC6.23□□□□□ -1.41
HNF4AP41235 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HNF4AP41235 ALKBH8-205ENST00000428149 4079 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
HNF4AP41235 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.23□□□□□ -1.41
HNF4AP41235 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
HNF4AP41235 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
HNF4AP41235 AL050403.1-201ENST00000448859 2006 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HNF4AP41235 AC018628.1-201ENST00000624147 3819 ntBASIC6.23□□□□□ -1.41
HNF4AP41235 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HNF4AP41235 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC6.23□□□□□ -1.41
HNF4AP41235 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
HNF4AP41235 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
HNF4AP41235 CHD8-202ENST00000430710 7420 ntAPPRIS P3 TSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 THAP12P8-201ENST00000447914 2115 ntBASIC6.22□□□□□ -1.41
HNF4AP41235 ERVH48-1-201ENST00000447535 2790 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 ECT2-216ENST00000540509 4406 ntAPPRIS P2 TSL 5 BASIC6.22□□□□□ -1.41
HNF4AP41235 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC6.22□□□□□ -1.41
HNF4AP41235 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 NBPF9-203ENST00000610300 2930 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 NBEA-207ENST00000537702 4089 ntTSL 2 BASIC6.22□□□□□ -1.41
HNF4AP41235 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC6.22□□□□□ -1.41
HNF4AP41235 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 CLDN10-201ENST00000299339 949 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
HNF4AP41235 SNORD8-201ENST00000363915 110 ntBASIC6.22□□□□□ -1.41
HNF4AP41235 PAGE2B-201ENST00000374971 493 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 SNORA70.9-201ENST00000384370 135 ntBASIC6.22□□□□□ -1.41
HNF4AP41235 OR2W4P-201ENST00000406496 926 ntBASIC6.22□□□□□ -1.41
HNF4AP41235 AC098592.2-201ENST00000413158 265 ntBASIC6.22□□□□□ -1.41
HNF4AP41235 AL138828.1-204ENST00000413745 898 ntTSL 5 BASIC6.22□□□□□ -1.41
HNF4AP41235 RPL12P43-201ENST00000420608 499 ntBASIC6.22□□□□□ -1.41
HNF4AP41235 AL356481.1-202ENST00000426704 970 ntTSL 2 BASIC6.22□□□□□ -1.41
HNF4AP41235 LINC01728-201ENST00000428529 524 ntTSL 2 BASIC6.22□□□□□ -1.41
HNF4AP41235 AL359644.1-204ENST00000440807 440 ntTSL 3 BASIC6.22□□□□□ -1.41
HNF4AP41235 AL020997.1-201ENST00000446554 349 ntBASIC6.22□□□□□ -1.41
HNF4AP41235 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC6.22□□□□□ -1.41
HNF4AP41235 AP003385.3-201ENST00000472498 287 ntBASIC6.22□□□□□ -1.41
HNF4AP41235 TTC26-205ENST00000474035 1193 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 RN7SL413P-201ENST00000482700 297 ntBASIC6.22□□□□□ -1.41
HNF4AP41235 AC093870.1-201ENST00000506837 213 ntBASIC6.22□□□□□ -1.41
HNF4AP41235 ATP6V0E1-202ENST00000517669 502 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 LINC00534-203ENST00000523406 812 ntTSL 3 BASIC6.22□□□□□ -1.41
HNF4AP41235 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC6.22□□□□□ -1.41
HNF4AP41235 TNFRSF17-201ENST00000053243 994 ntAPPRIS P2 TSL 1 (best) BASIC6.22□□□□□ -1.41
HNF4AP41235 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.22□□□□□ -1.41
HNF4AP41235 FAM66C-206ENST00000535567 724 ntTSL 5 BASIC6.22□□□□□ -1.41
HNF4AP41235 TMEM116-208ENST00000549537 1229 ntAPPRIS ALT2 TSL 2 BASIC6.22□□□□□ -1.41
HNF4AP41235 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.22□□□□□ -1.41
HNF4AP41235 CNEP1R1-204ENST00000562576 656 ntTSL 5 BASIC6.22□□□□□ -1.41
HNF4AP41235 RPGRIP1L-208ENST00000566096 893 ntTSL 2 BASIC6.22□□□□□ -1.41
HNF4AP41235 AC092376.1-201ENST00000569677 335 ntTSL 2 BASIC6.22□□□□□ -1.41
HNF4AP41235 AC133552.4-201ENST00000576103 676 ntBASIC6.22□□□□□ -1.41
HNF4AP41235 AC211486.4-201ENST00000621495 113 ntBASIC6.22□□□□□ -1.41
HNF4AP41235 AC004836.1-201ENST00000623032 634 ntBASIC6.22□□□□□ -1.41
HNF4AP41235 AC007603.3-201ENST00000636915 979 ntBASIC6.22□□□□□ -1.41
HNF4AP41235 ENTPD1-AS1-202ENST00000416301 4241 ntTSL 2 BASIC6.22□□□□□ -1.41
HNF4AP41235 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.22□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 70.1 ms