Protein–RNA interactions for Protein: P28288

ABCD3, ATP-binding cassette sub-family D member 3, humanhuman

Predictions only

Length 659 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3P28288 AC021180.1-201ENST00000508581 558 ntTSL 4 BASIC6.07□□□□□ -1.44
ABCD3P28288 SCARNA5-201ENST00000516201 276 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 SUMO2P19-201ENST00000518920 295 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC6.07□□□□□ -1.44
ABCD3P28288 KLRD1-209ENST00000543420 802 ntTSL 5 BASIC6.07□□□□□ -1.44
ABCD3P28288 AL157871.4-201ENST00000557226 385 ntTSL 2 BASIC6.07□□□□□ -1.44
ABCD3P28288 AC026956.1-201ENST00000558741 396 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 MIR9-3HG-211ENST00000561037 779 ntTSL 5 BASIC6.07□□□□□ -1.44
ABCD3P28288 AC092718.4-201ENST00000566639 716 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 PDE6G-203ENST00000571224 526 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
ABCD3P28288 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC6.07□□□□□ -1.44
ABCD3P28288 MIR5095-201ENST00000578844 88 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCD3P28288 AC011468.3-201ENST00000597886 332 ntTSL 3 BASIC6.07□□□□□ -1.44
ABCD3P28288 AC097467.3-216ENST00000599555 1293 ntTSL 5 BASIC6.07□□□□□ -1.44
ABCD3P28288 BUB1P1-201ENST00000603541 607 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 AL157899.1-201ENST00000604110 936 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 RMST_5.1-201ENST00000618704 126 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 AC073862.4-201ENST00000622982 854 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 AC114546.4-201ENST00000624413 369 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 AC099654.15-201ENST00000639802 509 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC6.07□□□□□ -1.44
ABCD3P28288 TGIF1-211ENST00000548489 1536 ntTSL 3 BASIC6.07□□□□□ -1.44
ABCD3P28288 AC034229.2-201ENST00000566945 2508 ntBASIC6.07□□□□□ -1.44
ABCD3P28288 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ABCD3P28288 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCD3P28288 TRIM38-201ENST00000357085 9413 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCD3P28288 COG2-209ENST00000534989 2963 ntTSL 2 BASIC6.07□□□□□ -1.44
ABCD3P28288 NUMB-204ENST00000535282 3198 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
ABCD3P28288 TXK-201ENST00000264316 2914 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCD3P28288 NEMF-201ENST00000298310 6234 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
ABCD3P28288 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC6.07□□□□□ -1.44
ABCD3P28288 RPL17-C18orf32-203ENST00000584895 1440 ntAPPRIS P1 TSL 3 BASIC6.07□□□□□ -1.44
ABCD3P28288 PLCZ1-201ENST00000266505 2148 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCD3P28288 NAPG-201ENST00000322897 3548 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCD3P28288 NME8-203ENST00000440017 1879 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
ABCD3P28288 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC6.07□□□□□ -1.44
ABCD3P28288 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
ABCD3P28288 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC6.07□□□□□ -1.44
ABCD3P28288 SLCO1C1-207ENST00000540354 2529 ntTSL 2 BASIC6.06□□□□□ -1.44
ABCD3P28288 AC023245.2-201ENST00000530760 2978 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 AC130360.2-201ENST00000533477 1556 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 ZNF402P-201ENST00000404435 3100 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 API5P1-201ENST00000424316 1510 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 PKIA-201ENST00000352966 1736 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
ABCD3P28288 CYP2C8-201ENST00000371270 1923 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
ABCD3P28288 AC010132.2-201ENST00000295493 1043 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC6.06□□□□□ -1.44
ABCD3P28288 MRPS6P2-201ENST00000381143 370 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 RNU1-46P-201ENST00000384425 164 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 AC104463.1-201ENST00000411431 365 ntTSL 5 BASIC6.06□□□□□ -1.44
ABCD3P28288 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
ABCD3P28288 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC6.06□□□□□ -1.44
ABCD3P28288 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC6.06□□□□□ -1.44
ABCD3P28288 BBIP1-205ENST00000436562 383 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
ABCD3P28288 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.06□□□□□ -1.44
ABCD3P28288 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.06□□□□□ -1.44
ABCD3P28288 AC064862.5-201ENST00000440618 334 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 PMS2P9-201ENST00000441237 515 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 Z99127.2-201ENST00000441426 334 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC6.06□□□□□ -1.44
ABCD3P28288 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC6.06□□□□□ -1.44
ABCD3P28288 SNRPCP11-201ENST00000492453 205 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 RPL24-206ENST00000495401 478 ntTSL 2 BASIC6.06□□□□□ -1.44
ABCD3P28288 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC6.06□□□□□ -1.44
ABCD3P28288 HMGB1P47-201ENST00000511281 589 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 RN7SKP34-201ENST00000516142 244 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 IGLV3-6-201ENST00000523937 250 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.06□□□□□ -1.44
ABCD3P28288 AC069208.1-201ENST00000540811 676 ntTSL 4 BASIC6.06□□□□□ -1.44
ABCD3P28288 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC6.06□□□□□ -1.44
ABCD3P28288 AC087721.1-201ENST00000559959 476 ntTSL 5 BASIC6.06□□□□□ -1.44
ABCD3P28288 AC145350.2-201ENST00000561541 821 ntTSL 5 BASIC6.06□□□□□ -1.44
ABCD3P28288 LINC00557-201ENST00000563184 1279 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC6.06□□□□□ -1.44
ABCD3P28288 RN7SL208P-201ENST00000577964 296 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 MIR4732-201ENST00000581873 76 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 Z98949.1-210ENST00000597548 766 ntTSL 5 BASIC6.06□□□□□ -1.44
ABCD3P28288 AC005479.3-201ENST00000602790 431 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 NQO2-209ENST00000606474 470 ntTSL 3 BASIC6.06□□□□□ -1.44
ABCD3P28288 AC025171.4-201ENST00000607250 1047 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 LINC00458-206ENST00000607494 849 ntTSL 3 BASIC6.06□□□□□ -1.44
ABCD3P28288 AC005899.7-201ENST00000618199 588 ntBASIC6.06□□□□□ -1.44
ABCD3P28288 AL078581.3-201ENST00000627304 744 ntTSL 5 BASIC6.06□□□□□ -1.44
ABCD3P28288 AL392046.2-202ENST00000635301 1113 ntTSL 5 BASIC6.06□□□□□ -1.44
ABCD3P28288 MCM3AP-AS1-204ENST00000432735 2302 ntTSL 2 BASIC6.06□□□□□ -1.44
ABCD3P28288 ZNF229-203ENST00000613197 4835 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ABCD3P28288 MYBPC1-223ENST00000553190 3777 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ABCD3P28288 OR52I2-203ENST00000641896 6591 ntAPPRIS ALT2 BASIC6.06□□□□□ -1.44
ABCD3P28288 SMC2-202ENST00000374787 4266 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
ABCD3P28288 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC6.06□□□□□ -1.44
ABCD3P28288 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC6.06□□□□□ -1.44
ABCD3P28288 NPY6R-202ENST00000510937 2988 ntTSL 3 BASIC6.06□□□□□ -1.44
ABCD3P28288 FSHR-202ENST00000406846 2784 ntAPPRIS P4 TSL 1 (best) BASIC6.06□□□□□ -1.44
ABCD3P28288 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.06□□□□□ -1.44
ABCD3P28288 SORCS1-209ENST00000612154 6862 ntTSL 5 BASIC6.06□□□□□ -1.44
ABCD3P28288 TMEM209-201ENST00000397622 3545 ntAPPRIS P2 TSL 1 (best) BASIC6.05□□□□□ -1.44
ABCD3P28288 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
ABCD3P28288 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.05□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 100.3 ms