Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 AL807757.2-201ENST00000416455 779 ntTSL 3 BASIC5.29□□□□□ -1.56
CCL1P22362 AL160163.1-201ENST00000417465 403 ntTSL 3 BASIC5.29□□□□□ -1.56
CCL1P22362 AC074035.1-201ENST00000420725 1184 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 AC016582.1-203ENST00000433142 502 ntTSL 3 BASIC5.29□□□□□ -1.56
CCL1P22362 USP24P1-201ENST00000433802 779 ntBASIC5.29□□□□□ -1.56
CCL1P22362 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.29□□□□□ -1.56
CCL1P22362 AL031681.1-201ENST00000443304 400 ntBASIC5.29□□□□□ -1.56
CCL1P22362 CXCR2P1-202ENST00000443392 1074 ntBASIC5.29□□□□□ -1.56
CCL1P22362 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
CCL1P22362 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC5.29□□□□□ -1.56
CCL1P22362 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC5.29□□□□□ -1.56
CCL1P22362 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC5.29□□□□□ -1.56
CCL1P22362 AC090958.1-201ENST00000511122 351 ntBASIC5.29□□□□□ -1.56
CCL1P22362 LINC02196-201ENST00000512838 568 ntTSL 4 BASIC5.29□□□□□ -1.56
CCL1P22362 NPM1P42-201ENST00000560329 862 ntBASIC5.29□□□□□ -1.56
CCL1P22362 AL133297.1-201ENST00000568149 404 ntTSL 2 BASIC5.29□□□□□ -1.56
CCL1P22362 MIR3157-201ENST00000578688 85 ntBASIC5.29□□□□□ -1.56
CCL1P22362 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.29□□□□□ -1.56
CCL1P22362 AC119403.2-201ENST00000590960 598 ntBASIC5.29□□□□□ -1.56
CCL1P22362 AC092067.1-201ENST00000592929 488 ntTSL 3 BASIC5.29□□□□□ -1.56
CCL1P22362 Metazoa_SRP.94-201ENST00000612609 250 ntBASIC5.29□□□□□ -1.56
CCL1P22362 MIR6883-201ENST00000614952 78 ntBASIC5.29□□□□□ -1.56
CCL1P22362 AL355974.3-201ENST00000617383 467 ntBASIC5.29□□□□□ -1.56
CCL1P22362 TTC33-206ENST00000636863 1149 ntTSL 5 BASIC5.29□□□□□ -1.56
CCL1P22362 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 IFRD1-216ENST00000535603 3397 ntTSL 2 BASIC5.29□□□□□ -1.56
CCL1P22362 DLG2-207ENST00000398309 7890 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 AC024587.1-201ENST00000505925 2157 ntBASIC5.29□□□□□ -1.56
CCL1P22362 DCN-218ENST00000551354 2924 ntTSL 3 BASIC5.29□□□□□ -1.56
CCL1P22362 AP000547.3-204ENST00000588548 2523 ntBASIC5.29□□□□□ -1.56
CCL1P22362 AP001157.1-201ENST00000550837 2339 ntBASIC5.29□□□□□ -1.56
CCL1P22362 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.29□□□□□ -1.56
CCL1P22362 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
CCL1P22362 FAT4-202ENST00000394329 16123 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
CCL1P22362 ZMYM2-210ENST00000610343 10200 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCL1P22362 IGSF6-201ENST00000268389 2785 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCL1P22362 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCL1P22362 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCL1P22362 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCL1P22362 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.28□□□□□ -1.56
CCL1P22362 DMD-205ENST00000359836 7339 ntTSL 5 BASIC5.28□□□□□ -1.56
CCL1P22362 ECT2L-205ENST00000541398 4483 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCL1P22362 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CCL1P22362 FCGR1B-202ENST00000369383 570 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCL1P22362 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.28□□□□□ -1.56
CCL1P22362 AC245096.1-201ENST00000413104 546 ntBASIC5.28□□□□□ -1.56
CCL1P22362 AP006748.1-201ENST00000418874 346 ntTSL 3 BASIC5.28□□□□□ -1.56
CCL1P22362 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.28□□□□□ -1.56
CCL1P22362 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.28□□□□□ -1.56
CCL1P22362 GAPDHP19-201ENST00000431768 1005 ntBASIC5.28□□□□□ -1.56
CCL1P22362 PSMD8P1-201ENST00000436275 769 ntBASIC5.28□□□□□ -1.56
CCL1P22362 OR3D1P-201ENST00000438288 955 ntBASIC5.28□□□□□ -1.56
CCL1P22362 LINC01350-202ENST00000439633 623 ntTSL 5 BASIC5.28□□□□□ -1.56
CCL1P22362 AL136460.1-201ENST00000442389 473 ntTSL 3 BASIC5.28□□□□□ -1.56
CCL1P22362 OSBPL10-AS1-205ENST00000444503 526 ntTSL 4 BASIC5.28□□□□□ -1.56
CCL1P22362 TRBV5-2-201ENST00000489095 273 ntBASIC5.28□□□□□ -1.56
CCL1P22362 MTCO1P55-201ENST00000489829 745 ntBASIC5.28□□□□□ -1.56
CCL1P22362 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC5.28□□□□□ -1.56
CCL1P22362 AC093325.1-201ENST00000508378 326 ntBASIC5.28□□□□□ -1.56
CCL1P22362 SNORA74.1-201ENST00000516320 180 ntBASIC5.28□□□□□ -1.56
CCL1P22362 LINC01484-201ENST00000517733 555 ntTSL 4 BASIC5.28□□□□□ -1.56
CCL1P22362 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.28□□□□□ -1.56
CCL1P22362 AC099805.1-205ENST00000521794 837 ntTSL 2 BASIC5.28□□□□□ -1.56
CCL1P22362 AC104248.1-201ENST00000522244 481 ntTSL 3 BASIC5.28□□□□□ -1.56
CCL1P22362 AP000755.1-201ENST00000527100 507 ntTSL 3 BASIC5.28□□□□□ -1.56
CCL1P22362 HNRNPCP1-201ENST00000556181 766 ntBASIC5.28□□□□□ -1.56
CCL1P22362 AC026462.3-201ENST00000565153 557 ntTSL 2 BASIC5.28□□□□□ -1.56
CCL1P22362 MIR4420-201ENST00000583944 77 ntBASIC5.28□□□□□ -1.56
CCL1P22362 AC020915.3-201ENST00000595301 550 ntTSL 5 BASIC5.28□□□□□ -1.56
CCL1P22362 AP001823.1-201ENST00000604056 1003 ntBASIC5.28□□□□□ -1.56
CCL1P22362 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC5.28□□□□□ -1.56
CCL1P22362 AC007100.1-201ENST00000606382 478 ntTSL 5 BASIC5.28□□□□□ -1.56
CCL1P22362 GAPDHP41-201ENST00000613707 975 ntBASIC5.28□□□□□ -1.56
CCL1P22362 OXSM-209ENST00000626005 309 ntTSL 3 BASIC5.28□□□□□ -1.56
CCL1P22362 RGPD2-203ENST00000638730 5306 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CCL1P22362 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCL1P22362 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.28□□□□□ -1.56
CCL1P22362 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC5.28□□□□□ -1.56
CCL1P22362 ORC4-214ENST00000535373 6710 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
CCL1P22362 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.28□□□□□ -1.56
CCL1P22362 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.28□□□□□ -1.56
CCL1P22362 ZNF432-202ENST00000594154 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCL1P22362 MPDZ-219ENST00000546205 6342 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
CCL1P22362 WDCP-201ENST00000295148 3817 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
CCL1P22362 KIF27-204ENST00000413982 4493 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCL1P22362 CLCN3-201ENST00000347613 3635 ntAPPRIS P4 TSL 1 (best) BASIC5.28□□□□□ -1.56
CCL1P22362 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
CCL1P22362 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC5.28□□□□□ -1.56
CCL1P22362 NAT1-201ENST00000307719 1815 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCL1P22362 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCL1P22362 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CCL1P22362 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
CCL1P22362 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCL1P22362 MEIS1-201ENST00000272369 4291 ntAPPRIS P2 TSL 1 (best) BASIC5.27□□□□□ -1.57
CCL1P22362 AL513550.1-201ENST00000418945 1638 ntTSL 2 BASIC5.27□□□□□ -1.57
CCL1P22362 SLC10A7-204ENST00000502607 1638 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCL1P22362 AC106799.3-201ENST00000562127 3300 ntTSL 2 BASIC5.27□□□□□ -1.57
CCL1P22362 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.27□□□□□ -1.57
CCL1P22362 RALGAPA1-202ENST00000382366 6328 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
CCL1P22362 MYBPC1-214ENST00000549145 4031 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms