Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 SAMD3-205ENST00000457563 1877 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH3P22223 LINC02025-201ENST00000488348 360 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH3P22223 RN7SL568P-201ENST00000493069 298 ntBASIC6.29□□□□□ -1.4
CDH3P22223 AC117500.1-201ENST00000497352 755 ntBASIC6.29□□□□□ -1.4
CDH3P22223 SNX24-205ENST00000506996 588 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
CDH3P22223 GUSBP9-201ENST00000510138 584 ntBASIC6.29□□□□□ -1.4
CDH3P22223 AC093816.1-201ENST00000515076 913 ntBASIC6.29□□□□□ -1.4
CDH3P22223 AC135983.3-201ENST00000528049 1226 ntBASIC6.29□□□□□ -1.4
CDH3P22223 AC084855.1-201ENST00000528696 572 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH3P22223 C11orf1-203ENST00000529270 1437 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH3P22223 OR4A41P-201ENST00000533053 928 ntBASIC6.29□□□□□ -1.4
CDH3P22223 AL359232.1-202ENST00000556874 1206 ntTSL 2 BASIC6.29□□□□□ -1.4
CDH3P22223 AC020978.2-201ENST00000563203 428 ntTSL 3 BASIC6.29□□□□□ -1.4
CDH3P22223 AL589765.6-201ENST00000601909 549 ntBASIC6.29□□□□□ -1.4
CDH3P22223 MIR6085-201ENST00000618314 110 ntBASIC6.29□□□□□ -1.4
CDH3P22223 AC004836.1-201ENST00000623032 634 ntBASIC6.29□□□□□ -1.4
CDH3P22223 AC114546.4-201ENST00000624413 369 ntBASIC6.29□□□□□ -1.4
CDH3P22223 AC025809.2-201ENST00000625085 1802 ntBASIC6.29□□□□□ -1.4
CDH3P22223 CASC19-228ENST00000641414 1684 ntBASIC6.29□□□□□ -1.4
CDH3P22223 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH3P22223 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH3P22223 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
CDH3P22223 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
CDH3P22223 ZC3H11A-204ENST00000367214 3451 ntAPPRIS P1 TSL 2 BASIC6.29□□□□□ -1.4
CDH3P22223 AL121594.3-201ENST00000557565 3857 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CDH3P22223 NAT2-201ENST00000286479 1322 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH3P22223 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH3P22223 LPAR6-201ENST00000345941 2428 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
CDH3P22223 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH3P22223 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDH3P22223 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CDH3P22223 TINAG-202ENST00000370864 692 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH3P22223 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDH3P22223 RNU1-46P-201ENST00000384425 164 ntBASIC6.28□□□□□ -1.4
CDH3P22223 PSMA6P1-201ENST00000400275 741 ntBASIC6.28□□□□□ -1.4
CDH3P22223 PMCHL1-203ENST00000423301 697 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDH3P22223 AL139158.1-201ENST00000424719 340 ntBASIC6.28□□□□□ -1.4
CDH3P22223 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH3P22223 GTF3AP6-201ENST00000432585 986 ntBASIC6.28□□□□□ -1.4
CDH3P22223 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH3P22223 AC007383.1-201ENST00000445875 636 ntBASIC6.28□□□□□ -1.4
CDH3P22223 AC097359.1-201ENST00000447946 463 ntBASIC6.28□□□□□ -1.4
CDH3P22223 AC005017.1-201ENST00000482002 490 ntBASIC6.28□□□□□ -1.4
CDH3P22223 AC022415.1-202ENST00000486612 523 ntBASIC6.28□□□□□ -1.4
CDH3P22223 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC6.28□□□□□ -1.4
CDH3P22223 HMGB3P14-201ENST00000494195 599 ntBASIC6.28□□□□□ -1.4
CDH3P22223 RPL5P14-201ENST00000494197 878 ntBASIC6.28□□□□□ -1.4
CDH3P22223 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH3P22223 AC104078.2-201ENST00000504344 541 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH3P22223 AC010445.1-201ENST00000507674 440 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH3P22223 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC6.28□□□□□ -1.4
CDH3P22223 CSNK1A1-207ENST00000515768 1098 ntAPPRIS P4 TSL 5 BASIC6.28□□□□□ -1.4
CDH3P22223 RNU6-1334P-201ENST00000516032 105 ntBASIC6.28□□□□□ -1.4
CDH3P22223 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH3P22223 KCTD9P4-201ENST00000526766 1166 ntBASIC6.28□□□□□ -1.4
CDH3P22223 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH3P22223 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CDH3P22223 AC023968.1-201ENST00000560719 475 ntBASIC6.28□□□□□ -1.4
CDH3P22223 RN7SL230P-201ENST00000580835 303 ntBASIC6.28□□□□□ -1.4
CDH3P22223 AC005828.3-201ENST00000583552 591 ntTSL 5 BASIC6.28□□□□□ -1.4
CDH3P22223 AC025171.4-201ENST00000607250 1047 ntBASIC6.28□□□□□ -1.4
CDH3P22223 uc_338.29-201ENST00000615099 168 ntBASIC6.28□□□□□ -1.4
CDH3P22223 BRCC3-209ENST00000620502 882 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
CDH3P22223 AL122023.1-201ENST00000622847 530 ntBASIC6.28□□□□□ -1.4
CDH3P22223 AL596275.2-207ENST00000641188 675 ntBASIC6.28□□□□□ -1.4
CDH3P22223 MAPK9-213ENST00000539014 1668 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDH3P22223 TMPRSS11BNL-202ENST00000510782 3202 ntTSL 2 BASIC6.28□□□□□ -1.4
CDH3P22223 PPBPP2-201ENST00000513150 1362 ntBASIC6.28□□□□□ -1.4
CDH3P22223 KLHL5-202ENST00000261426 3300 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDH3P22223 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
CDH3P22223 AC090518.1-201ENST00000562300 1495 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDH3P22223 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
CDH3P22223 MGC4859-201ENST00000634803 3118 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
CDH3P22223 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.27□□□□□ -1.4
CDH3P22223 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
CDH3P22223 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH3P22223 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH3P22223 OPRM1-219ENST00000522555 2440 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH3P22223 TRIM69-202ENST00000338264 1222 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH3P22223 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH3P22223 QKI-206ENST00000424802 954 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH3P22223 AC011753.2-201ENST00000425576 610 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH3P22223 AC021876.1-201ENST00000425959 359 ntBASIC6.27□□□□□ -1.41
CDH3P22223 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.27□□□□□ -1.41
CDH3P22223 AL592146.1-201ENST00000433869 1126 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH3P22223 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH3P22223 AL109807.1-201ENST00000438222 569 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH3P22223 AC108488.1-202ENST00000439547 482 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH3P22223 COX4I1P2-201ENST00000447446 547 ntBASIC6.27□□□□□ -1.41
CDH3P22223 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH3P22223 AC090589.1-201ENST00000473109 362 ntBASIC6.27□□□□□ -1.41
CDH3P22223 RPL23AP68-201ENST00000480924 445 ntBASIC6.27□□□□□ -1.41
CDH3P22223 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
CDH3P22223 AC083906.1-201ENST00000509298 406 ntBASIC6.27□□□□□ -1.41
CDH3P22223 AC092436.4-201ENST00000510905 483 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH3P22223 AC112242.1-201ENST00000515805 406 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH3P22223 AC110011.1-201ENST00000518260 582 ntTSL 3 BASIC6.27□□□□□ -1.41
CDH3P22223 LACTB2-AS1-203ENST00000518553 817 ntTSL 5 BASIC6.27□□□□□ -1.41
CDH3P22223 AC022915.3-201ENST00000518620 594 ntTSL 4 BASIC6.27□□□□□ -1.41
CDH3P22223 SNHG1-212ENST00000539975 955 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 71 ms