Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 LRRC37A3-202ENST00000334962 2654 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 ENTPD1-205ENST00000453258 5044 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 SEMA5A-AS1-201ENST00000510879 1679 ntTSL 2 BASIC8.2□□□□□ -1.1
ERCC3P19447 KIDINS220-206ENST00000473731 7248 ntTSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 ALMS1-207ENST00000614410 11700 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 ARHGAP32-202ENST00000392657 6556 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 ABLIM1-214ENST00000533213 7606 ntTSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 NXPE3-203ENST00000477909 3450 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 TTC21A-203ENST00000431162 4209 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 MS4A2-204ENST00000617306 3512 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
ERCC3P19447 NPIPB13-201ENST00000520915 3584 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 ZNF667-208ENST00000629654 3265 ntTSL 5 BASIC8.2□□□□□ -1.1
ERCC3P19447 RBM46-201ENST00000281722 2583 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 POU1F1-202ENST00000350375 1491 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 NOS1-206ENST00000618760 12283 ntTSL 5 BASIC8.19□□□□□ -1.1
ERCC3P19447 PROX1-202ENST00000366958 8240 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC8.19□□□□□ -1.1
ERCC3P19447 EPS8-209ENST00000542903 1858 ntTSL 2 BASIC8.19□□□□□ -1.1
ERCC3P19447 AC092111.1-201ENST00000618256 3358 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 CFAP65-201ENST00000295729 2259 ntAPPRIS ALT2 TSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 ENPP5-202ENST00000371383 3834 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC8.19□□□□□ -1.1
ERCC3P19447 SPATA31C1-201ENST00000420021 3895 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 AC137056.2-201ENST00000624055 1958 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 AC011525.1-201ENST00000562167 5676 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 BANF2-201ENST00000246090 595 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 TERB2-201ENST00000340827 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 OR8B3-201ENST00000354597 942 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
ERCC3P19447 OR8B2-201ENST00000375013 942 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
ERCC3P19447 SNORA68-201ENST00000384437 133 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 RNA5SP176-201ENST00000390956 110 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 AL034403.1-201ENST00000399414 885 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 AC233289.1-201ENST00000403700 508 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 NUCB1-AS1-201ENST00000416432 433 ntTSL 2 BASIC8.19□□□□□ -1.1
ERCC3P19447 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC8.19□□□□□ -1.1
ERCC3P19447 AC010099.3-201ENST00000423896 409 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 AC016994.1-201ENST00000425419 552 ntTSL 4 BASIC8.19□□□□□ -1.1
ERCC3P19447 AL139042.1-201ENST00000429137 305 ntTSL 3 BASIC8.19□□□□□ -1.1
ERCC3P19447 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC8.19□□□□□ -1.1
ERCC3P19447 AC245140.1-201ENST00000433825 341 ntTSL 5 BASIC8.19□□□□□ -1.1
ERCC3P19447 AC104698.1-201ENST00000435671 276 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 LINC01681-201ENST00000439184 760 ntTSL 2 BASIC8.19□□□□□ -1.1
ERCC3P19447 CR769776.1-201ENST00000441254 787 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 AL049649.1-201ENST00000444792 1105 ntTSL 5 BASIC8.19□□□□□ -1.1
ERCC3P19447 SPANXN4-202ENST00000446864 431 ntAPPRIS P2 TSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 LIX1L-AS1-207ENST00000448561 347 ntTSL 3 BASIC8.19□□□□□ -1.1
ERCC3P19447 AL035443.1-201ENST00000456631 304 ntTSL 3 BASIC8.19□□□□□ -1.1
ERCC3P19447 BX323845.2-201ENST00000458382 234 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 RN7SL180P-201ENST00000466769 294 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 RPL23P10-201ENST00000468780 412 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 ABHD10-204ENST00000494817 801 ntTSL 3 BASIC8.19□□□□□ -1.1
ERCC3P19447 AC020900.1-201ENST00000502568 565 ntTSL 4 BASIC8.19□□□□□ -1.1
ERCC3P19447 NREP-223ENST00000515855 801 ntTSL 4 BASIC8.19□□□□□ -1.1
ERCC3P19447 SNORA31.13-201ENST00000516624 135 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 AC103843.1-201ENST00000527318 682 ntTSL 4 BASIC8.19□□□□□ -1.1
ERCC3P19447 CBX5-204ENST00000550411 894 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 SNHG14-221ENST00000554726 1116 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 AC012593.1-208ENST00000587791 696 ntTSL 5 BASIC8.19□□□□□ -1.1
ERCC3P19447 AC009948.4-201ENST00000604692 675 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 PRSS3P3-201ENST00000612253 692 ntTSL 5 BASIC8.19□□□□□ -1.1
ERCC3P19447 AC231759.1-201ENST00000616455 597 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 AC021755.4-201ENST00000616620 456 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 CU638689.4-205ENST00000623313 596 ntTSL 4 BASIC8.19□□□□□ -1.1
ERCC3P19447 MIR325HG-208ENST00000630388 1043 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 AP3M1-201ENST00000355264 5124 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 LINC01205-201ENST00000489670 1331 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 RPS29-202ENST00000396020 7062 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 MITF-201ENST00000314557 1798 ntAPPRIS ALT1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 JAML-206ENST00000526620 1383 ntAPPRIS ALT2 TSL 2 BASIC8.19□□□□□ -1.1
ERCC3P19447 HSPA8P11-201ENST00000508840 1898 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 NCOA4P3-201ENST00000513203 1877 ntBASIC8.19□□□□□ -1.1
ERCC3P19447 ZNF83-205ENST00000594682 2890 ntTSL 4 BASIC8.19□□□□□ -1.1
ERCC3P19447 IRF6-201ENST00000367021 4306 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
ERCC3P19447 CTNNA2-202ENST00000361291 3071 ntTSL 5 BASIC8.18□□□□□ -1.1
ERCC3P19447 BCO2-203ENST00000438022 2598 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ERCC3P19447 AL355488.1-201ENST00000449169 2611 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ERCC3P19447 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC8.18□□□□□ -1.1
ERCC3P19447 CCDC129-203ENST00000409210 3773 ntAPPRIS ALT2 TSL 2 BASIC8.18□□□□□ -1.1
ERCC3P19447 SIRPG-AS1-202ENST00000456177 2795 ntTSL 2 BASIC8.18□□□□□ -1.1
ERCC3P19447 KNL1-201ENST00000346991 9573 ntAPPRIS P4 TSL 1 (best) BASIC8.18□□□□□ -1.1
ERCC3P19447 GYPA-212ENST00000616983 2538 ntAPPRIS ALT2 TSL 5 BASIC8.18□□□□□ -1.1
ERCC3P19447 CLEC4A-201ENST00000229332 1281 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ERCC3P19447 TPT1-204ENST00000379060 764 ntTSL 5 BASIC8.18□□□□□ -1.1
ERCC3P19447 LRRC37BP1-201ENST00000398851 714 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 GGA1-205ENST00000405147 575 ntTSL 4 BASIC8.18□□□□□ -1.1
ERCC3P19447 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC8.18□□□□□ -1.1
ERCC3P19447 RN7SKP91-201ENST00000410852 288 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 IGKV1OR2-3-201ENST00000411475 288 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 LANCL1-AS1-202ENST00000420418 476 ntTSL 3 BASIC8.18□□□□□ -1.1
ERCC3P19447 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC8.18□□□□□ -1.1
ERCC3P19447 OR2X1P-201ENST00000421144 687 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC8.18□□□□□ -1.1
ERCC3P19447 FAM96B-201ENST00000422424 676 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
ERCC3P19447 BBIP1-203ENST00000423273 492 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
ERCC3P19447 DNAJA1P1-201ENST00000425106 1187 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 RPL5P2-201ENST00000429598 854 ntBASIC8.18□□□□□ -1.1
ERCC3P19447 AL161457.1-201ENST00000434656 905 ntTSL 5 BASIC8.18□□□□□ -1.1
ERCC3P19447 PCBP1-AS1-232ENST00000442040 1111 ntTSL 3 BASIC8.18□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 70.6 ms