Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 AC025419.1-203ENST00000540652 726 ntTSL 3 BASIC6.27□□□□□ -1.41
PCNAP12004 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC6.27□□□□□ -1.41
PCNAP12004 AC005519.1-201ENST00000554490 601 ntBASIC6.27□□□□□ -1.41
PCNAP12004 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC6.27□□□□□ -1.41
PCNAP12004 OR4C49P-201ENST00000563891 900 ntBASIC6.27□□□□□ -1.41
PCNAP12004 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.27□□□□□ -1.41
PCNAP12004 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC6.27□□□□□ -1.41
PCNAP12004 AC010894.2-203ENST00000606406 499 ntTSL 3 BASIC6.27□□□□□ -1.41
PCNAP12004 AL136097.3-201ENST00000611097 505 ntBASIC6.27□□□□□ -1.41
PCNAP12004 IGKV2OR2-10-201ENST00000613976 311 ntBASIC6.27□□□□□ -1.41
PCNAP12004 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCNAP12004 SPTY2D1-AS1-206ENST00000636011 853 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
PCNAP12004 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
PCNAP12004 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.27□□□□□ -1.41
PCNAP12004 AC003973.2-201ENST00000596778 1394 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCNAP12004 NBPF19-205ENST00000612881 3715 ntTSL 5 BASIC6.27□□□□□ -1.41
PCNAP12004 GDA-209ENST00000545168 5362 ntTSL 2 BASIC6.27□□□□□ -1.41
PCNAP12004 AC067942.1-201ENST00000488045 1493 ntBASIC6.27□□□□□ -1.41
PCNAP12004 CUL1-204ENST00000617797 2508 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCNAP12004 PALMD-203ENST00000605497 1942 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
PCNAP12004 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
PCNAP12004 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.26□□□□□ -1.41
PCNAP12004 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.26□□□□□ -1.41
PCNAP12004 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.26□□□□□ -1.41
PCNAP12004 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 PINCR-201ENST00000440955 2228 ntTSL 2 BASIC6.26□□□□□ -1.41
PCNAP12004 CAP1P2-201ENST00000417455 1409 ntBASIC6.26□□□□□ -1.41
PCNAP12004 TRIM49D1-203ENST00000605881 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 IFIT1-201ENST00000371804 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 SOHLH2-202ENST00000379881 2193 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 TPMT-201ENST00000309983 3181 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 OR7A2P-201ENST00000304105 930 ntBASIC6.26□□□□□ -1.41
PCNAP12004 IMPA1-202ENST00000311489 1106 ntTSL 2 BASIC6.26□□□□□ -1.41
PCNAP12004 FASLG-201ENST00000340030 917 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 RNA5SP308-201ENST00000362532 115 ntBASIC6.26□□□□□ -1.41
PCNAP12004 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 RNU6-891P-201ENST00000384280 111 ntBASIC6.26□□□□□ -1.41
PCNAP12004 AC245036.1-201ENST00000391727 309 ntBASIC6.26□□□□□ -1.41
PCNAP12004 USP9YP19-201ENST00000412165 485 ntBASIC6.26□□□□□ -1.41
PCNAP12004 AL391811.1-201ENST00000416908 423 ntTSL 3 BASIC6.26□□□□□ -1.41
PCNAP12004 AC006509.1-201ENST00000420788 634 ntBASIC6.26□□□□□ -1.41
PCNAP12004 SPATA20P1-201ENST00000423089 438 ntBASIC6.26□□□□□ -1.41
PCNAP12004 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.26□□□□□ -1.41
PCNAP12004 AC079117.1-201ENST00000445178 1000 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 TAAR4P-201ENST00000454843 1039 ntBASIC6.26□□□□□ -1.41
PCNAP12004 AL450344.1-201ENST00000456018 639 ntTSL 2 BASIC6.26□□□□□ -1.41
PCNAP12004 CCNJP2-201ENST00000457810 1163 ntBASIC6.26□□□□□ -1.41
PCNAP12004 CR383656.1-201ENST00000484916 377 ntBASIC6.26□□□□□ -1.41
PCNAP12004 KDELR2-206ENST00000490996 655 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 AC139713.2-204ENST00000511042 342 ntTSL 5 BASIC6.26□□□□□ -1.41
PCNAP12004 RN7SKP67-201ENST00000515905 235 ntBASIC6.26□□□□□ -1.41
PCNAP12004 C5orf58-205ENST00000524171 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 TPRXL-210ENST00000532753 478 ntTSL 4 BASIC6.26□□□□□ -1.41
PCNAP12004 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.26□□□□□ -1.41
PCNAP12004 AC026471.4-201ENST00000569291 449 ntTSL 5 BASIC6.26□□□□□ -1.41
PCNAP12004 AC090286.3-201ENST00000573133 187 ntBASIC6.26□□□□□ -1.41
PCNAP12004 TTC39C-204ENST00000577185 533 ntTSL 3 BASIC6.26□□□□□ -1.41
PCNAP12004 AC016839.1-201ENST00000578162 867 ntBASIC6.26□□□□□ -1.41
PCNAP12004 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.26□□□□□ -1.41
PCNAP12004 RPL29P33-201ENST00000587474 316 ntBASIC6.26□□□□□ -1.41
PCNAP12004 MIR6070-201ENST00000613967 103 ntBASIC6.26□□□□□ -1.41
PCNAP12004 MIR6883-201ENST00000614952 78 ntBASIC6.26□□□□□ -1.41
PCNAP12004 MIR6849-201ENST00000618543 69 ntBASIC6.26□□□□□ -1.41
PCNAP12004 AC004836.1-201ENST00000623032 634 ntBASIC6.26□□□□□ -1.41
PCNAP12004 SNHG5-219ENST00000623910 631 ntTSL 2 BASIC6.26□□□□□ -1.41
PCNAP12004 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.26□□□□□ -1.41
PCNAP12004 PHEX-AS1-201ENST00000424650 1906 ntTSL 2 BASIC6.26□□□□□ -1.41
PCNAP12004 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC6.26□□□□□ -1.41
PCNAP12004 SEL1L3-203ENST00000502949 3500 ntTSL 2 BASIC6.26□□□□□ -1.41
PCNAP12004 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC6.26□□□□□ -1.41
PCNAP12004 FIGN-201ENST00000333129 9536 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 CCAR1-201ENST00000265872 4683 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 UGT2B15-201ENST00000338206 2077 ntAPPRIS P1 TSL 1 (best) BASIC6.26□□□□□ -1.41
PCNAP12004 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC6.26□□□□□ -1.41
PCNAP12004 SPANXN5-201ENST00000375511 1316 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCNAP12004 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCNAP12004 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC6.25□□□□□ -1.41
PCNAP12004 SMIM21-203ENST00000584508 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCNAP12004 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC6.25□□□□□ -1.41
PCNAP12004 OAZ3-204ENST00000479764 3789 ntTSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 FBXO25-204ENST00000382824 10386 ntAPPRIS P4 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCNAP12004 AC232271.1-201ENST00000602455 2715 ntBASIC6.25□□□□□ -1.41
PCNAP12004 IPO8-209ENST00000544829 3212 ntTSL 2 BASIC6.25□□□□□ -1.41
PCNAP12004 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.25□□□□□ -1.41
PCNAP12004 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.25□□□□□ -1.41
PCNAP12004 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.25□□□□□ -1.41
PCNAP12004 TRGV3-201ENST00000390346 537 ntAPPRIS P1 BASIC6.25□□□□□ -1.41
PCNAP12004 AP003170.5-201ENST00000397185 335 ntBASIC6.25□□□□□ -1.41
PCNAP12004 RPL12P23-201ENST00000405880 490 ntBASIC6.25□□□□□ -1.41
PCNAP12004 RNA5SP155-201ENST00000411154 129 ntBASIC6.25□□□□□ -1.41
PCNAP12004 RANP7-201ENST00000418085 644 ntBASIC6.25□□□□□ -1.41
PCNAP12004 AL589794.1-201ENST00000424971 390 ntBASIC6.25□□□□□ -1.41
PCNAP12004 AP003385.1-201ENST00000426387 893 ntBASIC6.25□□□□□ -1.41
PCNAP12004 BMP6P1-201ENST00000431230 679 ntBASIC6.25□□□□□ -1.41
Retrieved 100 of 98,524 protein–RNA pairs in 101.3 ms