Protein–RNA interactions for Protein: O60224

SSX4, Protein SSX4, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX4O60224 NDUFB9P1-201ENST00000604683 510 ntBASIC5.85□□□□□ -1.47
SSX4O60224 AC005828.7-201ENST00000607331 556 ntBASIC5.85□□□□□ -1.47
SSX4O60224 AC117490.2-201ENST00000610042 594 ntBASIC5.85□□□□□ -1.47
SSX4O60224 EDRF1-AS1-210ENST00000613304 569 ntTSL 5 BASIC5.85□□□□□ -1.47
SSX4O60224 AC005514.1-201ENST00000623521 208 ntBASIC5.85□□□□□ -1.47
SSX4O60224 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.85□□□□□ -1.47
SSX4O60224 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
SSX4O60224 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 ZNF253-203ENST00000589717 3519 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 RFX4-203ENST00000392842 3955 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
SSX4O60224 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SSX4O60224 AC019117.1-201ENST00000636929 1462 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX4O60224 VDAC2-214ENST00000543351 1424 ntAPPRIS P1 TSL 5 BASIC5.84□□□□□ -1.47
SSX4O60224 AC010132.4-201ENST00000569883 1368 ntBASIC5.84□□□□□ -1.47
SSX4O60224 AC083837.1-201ENST00000565297 2994 ntBASIC5.84□□□□□ -1.47
SSX4O60224 RBMS2-201ENST00000262031 8382 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSX4O60224 ZSCAN26-201ENST00000316606 2362 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSX4O60224 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX4O60224 ATP6V0E1-201ENST00000265093 773 ntTSL 2 BASIC5.84□□□□□ -1.47
SSX4O60224 OR2M7-201ENST00000317965 939 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSX4O60224 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSX4O60224 OR13F1-201ENST00000334726 960 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSX4O60224 Y_RNA.62-201ENST00000362840 99 ntBASIC5.84□□□□□ -1.47
SSX4O60224 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSX4O60224 TRAV13-1-201ENST00000390436 360 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSX4O60224 AC019178.1-201ENST00000392337 440 ntBASIC5.84□□□□□ -1.47
SSX4O60224 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC5.84□□□□□ -1.47
SSX4O60224 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX4O60224 VN1R12P-201ENST00000403778 876 ntBASIC5.84□□□□□ -1.47
SSX4O60224 DHFRP5-201ENST00000406944 564 ntBASIC5.84□□□□□ -1.47
SSX4O60224 MTND3P20-201ENST00000407663 186 ntBASIC5.84□□□□□ -1.47
SSX4O60224 UBTFL2-201ENST00000411859 1191 ntBASIC5.84□□□□□ -1.47
SSX4O60224 RPS26P38-201ENST00000414476 348 ntBASIC5.84□□□□□ -1.47
SSX4O60224 MTND4LP21-201ENST00000415303 295 ntBASIC5.84□□□□□ -1.47
SSX4O60224 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.84□□□□□ -1.47
SSX4O60224 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX4O60224 ETF1P1-206ENST00000427296 984 ntBASIC5.84□□□□□ -1.47
SSX4O60224 LSM3P3-201ENST00000436601 306 ntBASIC5.84□□□□□ -1.47
SSX4O60224 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC5.84□□□□□ -1.47
SSX4O60224 RPL7AP71-201ENST00000451120 739 ntBASIC5.84□□□□□ -1.47
SSX4O60224 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX4O60224 AC135999.1-201ENST00000478962 479 ntBASIC5.84□□□□□ -1.47
SSX4O60224 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC5.84□□□□□ -1.47
SSX4O60224 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX4O60224 TIFA-202ENST00000500655 769 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
SSX4O60224 LINC01340-201ENST00000504012 724 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX4O60224 AC016642.1-202ENST00000509476 641 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX4O60224 AC108727.2-201ENST00000512277 392 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX4O60224 AC011396.2-201ENST00000515598 582 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX4O60224 RNU6-1334P-201ENST00000516032 105 ntBASIC5.84□□□□□ -1.47
SSX4O60224 RNA5SP318-201ENST00000516352 92 ntBASIC5.84□□□□□ -1.47
SSX4O60224 AC104109.4-202ENST00000518409 1082 ntTSL 2 BASIC5.84□□□□□ -1.47
SSX4O60224 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX4O60224 IGHV3-57-201ENST00000520143 280 ntBASIC5.84□□□□□ -1.47
SSX4O60224 TPT1-AS1-207ENST00000520310 563 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX4O60224 AC023310.2-201ENST00000553844 547 ntBASIC5.84□□□□□ -1.47
SSX4O60224 AC067805.1-201ENST00000559344 470 ntBASIC5.84□□□□□ -1.47
SSX4O60224 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSX4O60224 HNRNPA1P74-201ENST00000560782 835 ntBASIC5.84□□□□□ -1.47
SSX4O60224 AC007494.1-201ENST00000562293 760 ntBASIC5.84□□□□□ -1.47
SSX4O60224 LINC01477-201ENST00000566101 1226 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSX4O60224 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC5.84□□□□□ -1.47
SSX4O60224 AC105411.1-203ENST00000568819 601 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX4O60224 ACTG1P15-201ENST00000570019 1063 ntBASIC5.84□□□□□ -1.47
SSX4O60224 AC008551.1-201ENST00000575612 405 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX4O60224 AC010401.3-201ENST00000576600 582 ntTSL 4 BASIC5.84□□□□□ -1.47
SSX4O60224 MIR3157-201ENST00000578688 85 ntBASIC5.84□□□□□ -1.47
SSX4O60224 PPIAL4C-201ENST00000585245 600 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSX4O60224 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC5.84□□□□□ -1.47
SSX4O60224 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX4O60224 DIMT1P1-201ENST00000603970 763 ntBASIC5.84□□□□□ -1.47
SSX4O60224 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC5.84□□□□□ -1.47
SSX4O60224 AL078595.2-201ENST00000605309 1780 ntBASIC5.84□□□□□ -1.47
SSX4O60224 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
SSX4O60224 BRAFP1-201ENST00000445336 2703 ntBASIC5.84□□□□□ -1.47
SSX4O60224 CYP51A1-204ENST00000450723 1729 ntTSL 2 BASIC5.84□□□□□ -1.47
SSX4O60224 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC5.84□□□□□ -1.47
SSX4O60224 ROR1-AS1-202ENST00000424995 2189 ntTSL 2 BASIC5.84□□□□□ -1.47
SSX4O60224 NFIB-221ENST00000637742 2166 ntTSL 5 BASIC5.84□□□□□ -1.47
SSX4O60224 ZC3H7A-214ENST00000575984 2632 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
SSX4O60224 TRAF5-201ENST00000261464 3972 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
SSX4O60224 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.48
SSX4O60224 OR8G5-203ENST00000641992 1560 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
SSX4O60224 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC5.84□□□□□ -1.48
SSX4O60224 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC5.84□□□□□ -1.48
SSX4O60224 ECHDC1-210ENST00000454859 2341 ntAPPRIS P3 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX4O60224 AC217777.1-201ENST00000570034 1471 ntBASIC5.83□□□□□ -1.48
SSX4O60224 IL1R1-202ENST00000409329 1862 ntTSL 5 BASIC5.83□□□□□ -1.48
SSX4O60224 AL137058.3-201ENST00000624531 3099 ntBASIC5.83□□□□□ -1.48
SSX4O60224 DCAF8L1-201ENST00000441525 3457 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SSX4O60224 VPS13B-203ENST00000358544 14094 ntAPPRIS P4 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX4O60224 PGBD4-201ENST00000397766 6612 ntAPPRIS P1 BASIC5.83□□□□□ -1.48
SSX4O60224 SOX5-216ENST00000546136 6975 ntAPPRIS P3 TSL 5 BASIC5.83□□□□□ -1.48
SSX4O60224 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX4O60224 RMDN2-202ENST00000354545 1381 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
SSX4O60224 MACROD2-203ENST00000402914 4425 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms