Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 VN2R1P-201ENST00000449668 1743 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.85□□□□□ -1.47
UPK1AO00322 UPRT-207ENST00000530743 1636 ntTSL 2 BASIC5.85□□□□□ -1.47
UPK1AO00322 MROH2B-203ENST00000506092 3745 ntTSL 2 BASIC5.85□□□□□ -1.47
UPK1AO00322 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
UPK1AO00322 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
UPK1AO00322 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
UPK1AO00322 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC5.85□□□□□ -1.47
UPK1AO00322 MARVELD2-204ENST00000454295 4376 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
UPK1AO00322 VRK2-206ENST00000435505 2446 ntAPPRIS P3 TSL 1 (best) BASIC5.85□□□□□ -1.47
UPK1AO00322 MUC5B-204ENST00000529681 17911 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
UPK1AO00322 ATF7IP2-201ENST00000324570 3396 ntTSL 5 BASIC5.85□□□□□ -1.47
UPK1AO00322 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.85□□□□□ -1.47
UPK1AO00322 PRKDC-202ENST00000338368 12784 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
UPK1AO00322 AC011346.1-201ENST00000638059 1359 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
UPK1AO00322 KYNUP3-201ENST00000574386 1341 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 PSMD10-204ENST00000361815 768 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
UPK1AO00322 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC5.85□□□□□ -1.47
UPK1AO00322 YWHAZP4-201ENST00000392459 708 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
UPK1AO00322 DNAJA1P3-201ENST00000399417 1194 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 HORMAD2-202ENST00000403975 2115 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
UPK1AO00322 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC5.85□□□□□ -1.47
UPK1AO00322 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
UPK1AO00322 OSTCP4-201ENST00000424397 449 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 AC112492.2-201ENST00000432774 1030 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 SOCS5P1-201ENST00000440415 949 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 AL356121.1-201ENST00000442911 156 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 MAGI2-AS3-210ENST00000448636 798 ntTSL 5 BASIC5.85□□□□□ -1.47
UPK1AO00322 AC136489.1-203ENST00000450246 736 ntTSL 5 BASIC5.85□□□□□ -1.47
UPK1AO00322 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC5.85□□□□□ -1.47
UPK1AO00322 CEACAMP11-201ENST00000455211 583 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 RANP2-201ENST00000456833 229 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.85□□□□□ -1.47
UPK1AO00322 AC090204.1-202ENST00000500843 737 ntTSL 5 BASIC5.85□□□□□ -1.47
UPK1AO00322 AC023794.2-201ENST00000504891 528 ntTSL 3 BASIC5.85□□□□□ -1.47
UPK1AO00322 LINC01386-201ENST00000506196 440 ntTSL 3 BASIC5.85□□□□□ -1.47
UPK1AO00322 OR4D12P-201ENST00000509361 911 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 KHDC1P1-201ENST00000511053 508 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 RNA5SP206-201ENST00000516703 121 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 AC097173.2-201ENST00000518701 474 ntTSL 3 BASIC5.85□□□□□ -1.47
UPK1AO00322 GLYAT-203ENST00000529732 1070 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
UPK1AO00322 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC5.85□□□□□ -1.47
UPK1AO00322 LINC02319-201ENST00000555852 349 ntTSL 3 BASIC5.85□□□□□ -1.47
UPK1AO00322 AP001357.1-201ENST00000586304 1053 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.85□□□□□ -1.47
UPK1AO00322 AC012368.3-201ENST00000604190 219 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 AC004890.3-201ENST00000605566 1095 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 LINC00484-208ENST00000609752 591 ntTSL 4 BASIC5.85□□□□□ -1.47
UPK1AO00322 AC007603.3-201ENST00000636915 979 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 FAR2-201ENST00000182377 2095 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
UPK1AO00322 AC025470.1-201ENST00000510053 2032 ntBASIC5.85□□□□□ -1.47
UPK1AO00322 LINC01951-201ENST00000377300 1925 ntTSL 2 BASIC5.85□□□□□ -1.47
UPK1AO00322 AMY1B-201ENST00000330330 1862 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
UPK1AO00322 MMP12-201ENST00000571244 1874 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
UPK1AO00322 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC5.85□□□□□ -1.47
UPK1AO00322 SLC17A2-203ENST00000377850 2524 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
UPK1AO00322 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.85□□□□□ -1.47
UPK1AO00322 DNAH17-201ENST00000389840 13723 ntAPPRIS P5 TSL 5 BASIC5.85□□□□□ -1.47
UPK1AO00322 TMED3-202ENST00000424155 16555 ntTSL 3 BASIC5.85□□□□□ -1.47
UPK1AO00322 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
UPK1AO00322 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC5.84□□□□□ -1.47
UPK1AO00322 GTDC1-212ENST00000463875 1563 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UPK1AO00322 STYX-202ENST00000442123 4554 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UPK1AO00322 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UPK1AO00322 TMEM8B-202ENST00000377991 14112 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UPK1AO00322 SPATA31D5P-202ENST00000527857 4863 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UPK1AO00322 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC5.84□□□□□ -1.47
UPK1AO00322 HHLA2-211ENST00000619531 2548 ntAPPRIS P3 TSL 5 BASIC5.84□□□□□ -1.47
UPK1AO00322 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC5.84□□□□□ -1.47
UPK1AO00322 A1CF-206ENST00000395489 9517 ntTSL 2 BASIC5.84□□□□□ -1.47
UPK1AO00322 SYCP2L-207ENST00000543878 2436 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
UPK1AO00322 CCNT2P1-201ENST00000423082 1315 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 NLRP8-201ENST00000291971 3934 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
UPK1AO00322 IKZF3-210ENST00000377958 1837 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UPK1AO00322 SMR3B-201ENST00000304915 785 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UPK1AO00322 TMEM31-201ENST00000319560 728 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
UPK1AO00322 RPL11P4-201ENST00000332269 436 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
UPK1AO00322 PRELID1P1-201ENST00000403549 660 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 RN7SKP121-201ENST00000410842 305 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 AC009965.1-201ENST00000411436 570 ntTSL 4 BASIC5.84□□□□□ -1.47
UPK1AO00322 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UPK1AO00322 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC5.84□□□□□ -1.47
UPK1AO00322 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.84□□□□□ -1.47
UPK1AO00322 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC5.84□□□□□ -1.47
UPK1AO00322 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.84□□□□□ -1.47
UPK1AO00322 POU5F1P5-201ENST00000445059 658 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC5.84□□□□□ -1.47
UPK1AO00322 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.84□□□□□ -1.47
UPK1AO00322 AC112187.1-201ENST00000455837 479 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 AC004890.1-201ENST00000461005 181 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 PEX5L-AS2-201ENST00000462801 630 ntTSL 2 BASIC5.84□□□□□ -1.47
UPK1AO00322 RPS7P10-201ENST00000464254 603 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 SYPL1-205ENST00000470347 1193 ntTSL 3 BASIC5.84□□□□□ -1.47
UPK1AO00322 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC5.84□□□□□ -1.47
UPK1AO00322 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.84□□□□□ -1.47
UPK1AO00322 AC117500.1-201ENST00000497352 755 ntBASIC5.84□□□□□ -1.47
UPK1AO00322 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
UPK1AO00322 MRPS5P3-201ENST00000515577 166 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 117.8 ms