Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 AL451081.1-201ENST00000413159 245 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 SEPT7P8-201ENST00000413308 775 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 VN1R31P-201ENST00000417498 730 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AL451047.1-201ENST00000424451 814 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 LINC00575-201ENST00000426551 910 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AL513329.1-201ENST00000426575 657 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 ETF1P1-206ENST00000427296 984 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AC239367.3-201ENST00000428996 814 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 MRPL50P1-201ENST00000431951 384 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 MTND2P21-201ENST00000436242 1042 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AC234771.2-201ENST00000445718 597 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AL354793.1-201ENST00000446028 713 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 ZNF197-AS1-201ENST00000447691 623 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AC025947.1-201ENST00000447943 299 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 NCAPH-205ENST00000455200 2952 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AC022336.1-201ENST00000475510 337 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AC108729.2-201ENST00000476543 840 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 STRADBP1-201ENST00000478954 1281 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 PTTG2-201ENST00000504686 691 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 OR10J4-201ENST00000504970 935 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 EPPIN-WFDC6-201ENST00000504988 1156 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AC093816.1-201ENST00000515076 913 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 RNU6-1334P-201ENST00000516032 105 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 ZFAND1-204ENST00000517588 633 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AC005363.1-201ENST00000530779 351 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AC100768.2-201ENST00000534068 683 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 MAGOHB-204ENST00000539554 666 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AC009387.1-201ENST00000549163 441 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AL135838.1-201ENST00000556080 235 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AC025917.1-201ENST00000562062 612 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 LINC02028-206ENST00000593326 810 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AC027449.1-201ENST00000608890 407 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AC068726.1-201ENST00000610993 341 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AL445647.2-201ENST00000615170 130 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AL390964.1-201ENST00000622486 845 ntTSL 3 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AP003485.1-201ENST00000625093 753 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AC127070.3-201ENST00000503695 3263 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 FMN1-211ENST00000561249 4251 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 ZHX3-205ENST00000432768 3551 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 LINC01011-204ENST00000605901 1573 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AC092701.1-201ENST00000623627 1551 ntBASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 REG1CP-201ENST00000377435 1705 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 LRTOMT-210ENST00000447974 2007 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 DAZ3-202ENST00000382365 3503 ntAPPRIS P5 TSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 SLC2A14-201ENST00000340749 3699 ntAPPRIS ALT2 TSL 2 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 OR3A3-203ENST00000641141 3800 ntAPPRIS P1 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 AL121985.1-201ENST00000598917 1308 ntTSL 5 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 CALB1-208ENST00000518457 1490 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 ZSCAN4-201ENST00000318203 2246 ntAPPRIS P1 TSL 2 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 LINC02532-208ENST00000602621 2232 ntTSL 2 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 KCNA2-208ENST00000638616 3279 ntAPPRIS P1 TSL 5 BASIC6.72□□□□□ -1.33
PCDHB1Q9Y5F3 SCARB2-207ENST00000638295 4507 ntTSL 5 BASIC6.71□□□□□ -1.33
PCDHB1Q9Y5F3 NUMB-203ENST00000359560 3309 ntAPPRIS P3 TSL 5 BASIC6.71□□□□□ -1.33
PCDHB1Q9Y5F3 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
PCDHB1Q9Y5F3 SPIRE1-206ENST00000453447 2107 ntTSL 5 BASIC6.71□□□□□ -1.33
PCDHB1Q9Y5F3 CDY11P-201ENST00000447168 1651 ntBASIC6.71□□□□□ -1.33
PCDHB1Q9Y5F3 LIN7C-202ENST00000524596 4290 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHB1Q9Y5F3 LIPF-201ENST00000238983 1376 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHB1Q9Y5F3 MUC15-204ENST00000527569 1386 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHB1Q9Y5F3 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
PCDHB1Q9Y5F3 AC105114.1-201ENST00000624795 1862 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 HUWE1-203ENST00000342160 14796 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 CCRL2-201ENST00000357392 1593 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 CDY2A-202ENST00000426790 2369 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 CDY2B-202ENST00000544303 2369 ntAPPRIS P5 TSL 5 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AC027279.1-201ENST00000568885 4284 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AL031651.1-201ENST00000615357 1438 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 RTN4-203ENST00000357376 4110 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 REG1A-201ENST00000233735 808 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AC096571.1-201ENST00000325407 306 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 SSX3-202ENST00000376893 800 ntTSL 2 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 MIR1275-201ENST00000408770 80 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 RAB9AP4-201ENST00000415230 609 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AL512637.2-201ENST00000431287 1256 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AC099796.1-201ENST00000433377 683 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 RAB9AP5-201ENST00000437794 597 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 RAB9AP2-201ENST00000443911 597 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 AL606517.1-201ENST00000446914 387 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 CCDC13-AS1-202ENST00000446950 554 ntTSL 4 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 VNN3-210ENST00000450865 596 ntTSL 4 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 CTSLP6-201ENST00000458273 1002 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 NPM1P17-201ENST00000479221 602 ntBASIC6.71□□□□□ -1.34
PCDHB1Q9Y5F3 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 147.1 ms