Protein–RNA interactions for Protein: Q9UPT8

ZC3H4, Zinc finger CCCH domain-containing protein 4, humanhuman

Known RBP Predictions only

Length 1,303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZC3H4Q9UPT8 AP002812.3-201ENST00000527012 551 ntTSL 5 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 AP004247.1-201ENST00000531556 1289 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 OR4A1P-201ENST00000532342 920 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 AC006065.4-204ENST00000537478 654 ntTSL 2 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 AC006065.4-203ENST00000541065 526 ntTSL 2 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 AC245505.1-201ENST00000556398 224 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 CASC16-202ENST00000563844 610 ntTSL 3 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 AC022872.1-201ENST00000568391 781 ntTSL 2 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 AC090286.3-201ENST00000573133 187 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 SLC14A1-214ENST00000589700 1022 ntTSL 1 (best) BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 AL121830.1-206ENST00000608476 1254 ntTSL 5 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 Metazoa_SRP.77-201ENST00000616915 252 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 AC009878.1-201ENST00000621819 340 ntBASIC9□□□□□ -0.97
ZC3H4Q9UPT8 DDX1-208ENST00000621973 2183 ntTSL 5 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 USF3-201ENST00000316407 13708 ntAPPRIS P2 TSL 5 BASIC9□□□□□ -0.97
ZC3H4Q9UPT8 FANCL-201ENST00000233741 1683 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 KIAA1217-201ENST00000307544 3281 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 SLC16A4-203ENST00000437429 2372 ntTSL 2 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 TBCK-201ENST00000273980 8101 ntAPPRIS P1 TSL 5 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 ERC1-202ENST00000355446 5796 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 ERC1-203ENST00000360905 5789 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 MUM1L1-201ENST00000337685 4308 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 USP32P2-201ENST00000412260 4329 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 SLC9A6-214ENST00000637581 4872 ntTSL 5 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 SLC31A1-201ENST00000374212 4744 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 GLS2-215ENST00000539272 2174 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 CCDC77-202ENST00000412006 2253 ntAPPRIS ALT2 TSL 2 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 FGD6-201ENST00000343958 9288 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 GATAD2B-203ENST00000634408 1825 ntTSL 5 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 CHURC1-203ENST00000549115 2629 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 KDM4C-205ENST00000428870 3039 ntTSL 2 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 BSPH1-201ENST00000344839 654 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 MIR365B-201ENST00000362317 111 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 RNA5SP188-201ENST00000362916 129 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 RN7SKP208-201ENST00000365474 361 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 SNORA70.5-201ENST00000365519 135 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 THEM5-201ENST00000368817 984 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 SEPT7P8-201ENST00000413308 775 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 NPM1P11-201ENST00000417106 855 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC006007.1-201ENST00000422084 672 ntTSL 2 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC012668.2-201ENST00000431727 503 ntTSL 3 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 MTND1P32-201ENST00000433043 938 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC007563.3-201ENST00000433233 371 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AL731892.1-201ENST00000437364 1192 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 RPS27P5-201ENST00000444247 244 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 CDC27P1-201ENST00000445384 715 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AL354989.1-201ENST00000448245 635 ntTSL 3 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 NDUFB3-204ENST00000454214 547 ntAPPRIS P1 TSL 2 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 RPL7P32-201ENST00000457119 744 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC018638.3-201ENST00000461273 132 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 RPSAP37-201ENST00000470913 821 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC015820.1-201ENST00000473882 321 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 LINC00518-202ENST00000479822 906 ntTSL 3 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC011825.1-201ENST00000484967 388 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 CRISP1-203ENST00000505118 1296 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC109361.2-202ENST00000512514 483 ntTSL 3 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC022447.1-201ENST00000515358 464 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 IGLV1-62-201ENST00000518003 441 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 C1GALT1P3-201ENST00000522049 819 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 OR4A7P-201ENST00000531463 910 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AP003032.2-201ENST00000533697 686 ntTSL 3 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 TOMM20P1-201ENST00000534518 427 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC091814.1-201ENST00000545258 719 ntTSL 3 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC010198.2-201ENST00000550612 259 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC087465.1-201ENST00000560574 245 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AP005205.1-201ENST00000563503 508 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC046158.2-201ENST00000568764 707 ntTSL 3 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC134669.1-201ENST00000581275 672 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC015878.1-201ENST00000584611 679 ntTSL 3 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 LINC00663-206ENST00000589910 732 ntTSL 2 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 NUTM2B-AS1-209ENST00000596088 366 ntTSL 3 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC009237.15-201ENST00000610252 501 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AL137000.1-201ENST00000610528 1244 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 Metazoa_SRP.70-201ENST00000612622 273 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AL359513.1-201ENST00000614364 557 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC010333.3-201ENST00000615100 402 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC087894.3-201ENST00000623682 349 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC211433.3-201ENST00000623770 375 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC022743.1-201ENST00000624990 664 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 SNORA43.5-201ENST00000631270 138 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AC099654.10-201ENST00000640395 161 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 REG4-203ENST00000369401 2327 ntTSL 1 (best) BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 AL365475.1-201ENST00000565135 1949 ntBASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 MARF1-201ENST00000396368 7743 ntAPPRIS P3 TSL 1 (best) BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 SERPINB7-206ENST00000540675 2193 ntTSL 2 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 MAP3K9-207ENST00000611979 10497 ntTSL 5 BASIC8.99□□□□□ -0.97
ZC3H4Q9UPT8 ASNSP6-201ENST00000592770 1618 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 TOPORSLP1-201ENST00000467693 2102 ntBASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 VRK2-203ENST00000417641 2381 ntAPPRIS ALT2 TSL 2 BASIC8.98□□□□□ -0.97
ZC3H4Q9UPT8 SF3A3P1-201ENST00000446317 1477 ntBASIC8.98□□□□□ -0.97
Retrieved 100 of 98,524 protein–RNA pairs in 71.9 ms