Protein–RNA interactions for Protein: Q9UBQ0

VPS29, Vacuolar protein sorting-associated protein 29, humanhuman

Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29Q9UBQ0 PLN-201ENST00000357525 2001 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AC127164.1-201ENST00000548738 4196 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 RXFP2-201ENST00000298386 3319 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 POM121L2-202ENST00000444565 3108 ntAPPRIS P2 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 ANLN-202ENST00000396068 4661 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 ZMYND11-202ENST00000381584 2709 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 GVINP1-201ENST00000526769 8438 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 OR7D2-202ENST00000641288 3248 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 HHLA2-206ENST00000467761 2379 ntAPPRIS P3 TSL 5 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 PSG1-206ENST00000595356 1903 ntAPPRIS ALT2 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AC016907.2-203ENST00000455424 3563 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 OR4Q3-201ENST00000331723 942 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 RNA5SP346-201ENST00000363541 121 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 RNU1-59P-201ENST00000364829 162 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 PRELID1P1-201ENST00000403549 660 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 RPL23AP18-201ENST00000416139 468 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AC015977.1-201ENST00000418887 292 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AC104463.2-201ENST00000428573 314 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AL021408.1-201ENST00000430428 552 ntTSL 4 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 UBQLN1P1-207ENST00000441056 1169 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 PA2G4P1-201ENST00000442248 1197 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 CXCR2P1-202ENST00000443392 1074 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AC092601.1-201ENST00000444526 383 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 CATSPER2P1-205ENST00000446479 419 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 XXYLT1-AS2-202ENST00000447975 784 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AL133351.3-201ENST00000454998 193 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AL035690.1-201ENST00000490892 383 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 RN7SL104P-201ENST00000498686 293 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AC006296.1-201ENST00000514401 591 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 RN7SKP67-201ENST00000515905 235 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 RNA5SP206-201ENST00000516703 121 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AL049836.2-201ENST00000553318 513 ntTSL 5 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AC012050.1-201ENST00000558185 472 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 DSG1-AS1-202ENST00000578477 588 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 CCDC58P1-201ENST00000578567 430 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 GLYATL1P2-202ENST00000588046 902 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AL591167.1-201ENST00000607321 456 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 U1.25-201ENST00000614085 162 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 U1.34-201ENST00000618578 162 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 U1.31-201ENST00000620022 160 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 ZNF658B-201ENST00000602828 3408 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AC034229.2-201ENST00000566945 2508 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 CERS3-203ENST00000538112 1856 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 AL133243.2-201ENST00000610331 1621 ntBASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 LGI1-212ENST00000630184 2936 ntTSL 2 BASIC5.92□□□□□ -1.46
VPS29Q9UBQ0 COPS4-209ENST00000511653 1695 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 SLC24A5-204ENST00000482911 2984 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AFP-202ENST00000395792 2484 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC073365.1-203ENST00000641055 1992 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AP002478.1-201ENST00000577848 1455 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 TMPRSS15-201ENST00000284885 3947 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 CPS1-204ENST00000451903 4770 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC024651.2-201ENST00000562480 2098 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 UGGT1-201ENST00000259253 10650 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 ZNF26-202ENST00000534834 4853 ntAPPRIS ALT2 TSL 2 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 RNA5SP77-201ENST00000365394 120 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 IGLV3-16-201ENST00000390311 385 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 MTND2P12-201ENST00000417560 1252 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC018878.1-201ENST00000419904 433 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 C14orf105-202ENST00000422976 1153 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC094019.1-201ENST00000434678 472 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC245291.3-201ENST00000443400 292 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC113331.2-201ENST00000445557 926 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC234771.2-201ENST00000445718 597 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 RPS18P1-201ENST00000447840 458 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 HIGD1AP16-201ENST00000450986 258 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 RN7SL352P-201ENST00000466002 277 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC117500.1-201ENST00000497352 755 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC008945.1-201ENST00000505144 499 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AK6-204ENST00000512561 587 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC025766.1-201ENST00000514061 409 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 SNORA74.1-201ENST00000516320 180 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 Y_RNA.710-201ENST00000516975 110 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 OR4A6P-201ENST00000534364 970 ntBASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 VEPH1-219ENST00000537559 992 ntTSL 5 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC092490.1-202ENST00000540299 809 ntTSL 3 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC5.91□□□□□ -1.46
VPS29Q9UBQ0 AC135050.4-201ENST00000568708 504 ntTSL 5 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 102.1 ms