Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 AC123567.2-202ENST00000550759 446 ntTSL 3 BASIC5.83□□□□□ -1.48
VAPAQ9P0L0 LINC01146-207ENST00000557339 397 ntTSL 3 BASIC5.83□□□□□ -1.48
VAPAQ9P0L0 ZNF431-203ENST00000594425 610 ntTSL 2 BASIC5.83□□□□□ -1.48
VAPAQ9P0L0 ZNF677-211ENST00000601828 719 ntTSL 2 BASIC5.83□□□□□ -1.48
VAPAQ9P0L0 AC023206.1-201ENST00000605824 298 ntBASIC5.83□□□□□ -1.48
VAPAQ9P0L0 AL591167.1-201ENST00000607321 456 ntBASIC5.83□□□□□ -1.48
VAPAQ9P0L0 AL008582.1-201ENST00000609612 442 ntBASIC5.83□□□□□ -1.48
VAPAQ9P0L0 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC5.83□□□□□ -1.48
VAPAQ9P0L0 MVP-219ENST00000629059 120 ntTSL 5 BASIC5.83□□□□□ -1.48
VAPAQ9P0L0 AC099329.1-203ENST00000629885 767 ntTSL 5 BASIC5.83□□□□□ -1.48
VAPAQ9P0L0 AC099654.11-201ENST00000638857 294 ntBASIC5.83□□□□□ -1.48
VAPAQ9P0L0 GBP3-202ENST00000370481 3067 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VAPAQ9P0L0 AL133243.2-201ENST00000610331 1621 ntBASIC5.83□□□□□ -1.48
VAPAQ9P0L0 HGF-205ENST00000423064 1990 ntTSL 1 (best) BASIC5.83□□□□□ -1.48
VAPAQ9P0L0 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC5.83□□□□□ -1.48
VAPAQ9P0L0 CRNDE-212ENST00000613942 2601 ntTSL 5 BASIC5.83□□□□□ -1.48
VAPAQ9P0L0 INTS12-211ENST00000618810 1502 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
VAPAQ9P0L0 DZIP3-202ENST00000463306 4246 ntAPPRIS P1 TSL 1 (best) BASIC5.83□□□□□ -1.48
VAPAQ9P0L0 KIAA1109-201ENST00000264501 15896 ntAPPRIS P1 TSL 5 BASIC5.83□□□□□ -1.48
VAPAQ9P0L0 RGPD1-206ENST00000641458 5271 ntAPPRIS ALT2 BASIC5.83□□□□□ -1.48
VAPAQ9P0L0 UGT2A1-206ENST00000514019 2376 ntTSL 2 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AC083837.1-201ENST00000565297 2994 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 TRIP12-204ENST00000389045 5355 ntAPPRIS ALT2 TSL 1 (best) BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 LINC01748-203ENST00000634836 3229 ntTSL 5 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 RASGRP1-203ENST00000450598 2296 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AC104024.1-201ENST00000428142 2201 ntTSL 2 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AC004852.2-201ENST00000614289 2218 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 LINC01958-201ENST00000637749 1941 ntTSL 5 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 ZNF192P1-201ENST00000440790 1628 ntTSL 5 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AC008080.4-201ENST00000420185 1589 ntTSL 2 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 RPS29-201ENST00000245458 296 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 SNORD1C-201ENST00000363315 78 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 CACNB4-203ENST00000397327 2112 ntTSL 5 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 DHFRP2-201ENST00000414224 547 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AC006509.1-201ENST00000420788 634 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AC016745.1-201ENST00000422178 508 ntTSL 5 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 TAB2-AS1-201ENST00000424421 730 ntTSL 5 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 RPS3AP38-201ENST00000435889 763 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 RPS10P14-201ENST00000440748 502 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 GAPDHP37-201ENST00000442317 968 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 RAB28P2-201ENST00000454299 641 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 RN7SL413P-201ENST00000482700 297 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 MINOS1P4-201ENST00000515470 318 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 SNHG1-211ENST00000539921 1071 ntTSL 2 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AC024224.2-201ENST00000544225 782 ntTSL 3 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 RPL41P2-201ENST00000544920 409 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AC079600.3-201ENST00000547898 447 ntTSL 5 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 LINC02412-201ENST00000552584 1269 ntTSL 5 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AL137230.1-202ENST00000553996 420 ntTSL 2 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AL356017.1-201ENST00000556796 594 ntTSL 4 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AL049779.3-201ENST00000557141 606 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 MED31-202ENST00000574128 619 ntTSL 3 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 MIR4420-201ENST00000583944 77 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AC010998.3-201ENST00000613871 631 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 MIR6829-201ENST00000620375 67 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 SATB1-209ENST00000454909 3755 ntAPPRIS P1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AL139039.3-201ENST00000413129 1475 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 MAGI2-205ENST00000519748 3316 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 MAGI2-222ENST00000636039 5671 ntTSL 5 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 DSC1-201ENST00000257197 4271 ntAPPRIS ALT1 TSL 1 (best) BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AC084816.1-210ENST00000540895 1920 ntTSL 2 BASIC5.82□□□□□ -1.48
VAPAQ9P0L0 AC024587.1-201ENST00000505925 2157 ntBASIC5.82□□□□□ -1.48
VAPAQ9P0L0 FBXO9-201ENST00000244426 4559 ntTSL 1 (best) BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 TAF12-202ENST00000373824 1334 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 PIP5K1B-201ENST00000265382 2654 ntAPPRIS P1 TSL 1 (best) BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 DLD-205ENST00000440410 1993 ntTSL 2 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 OR10A2-201ENST00000307322 1053 ntAPPRIS P1 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 RNU1-49P-201ENST00000363468 159 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 SNORA77.2-201ENST00000408571 112 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 RNA5SP155-201ENST00000411154 129 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 PTCD2P2-201ENST00000415579 1095 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 RPL21P50-201ENST00000417698 477 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AC002127.1-201ENST00000421305 225 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AP003385.1-201ENST00000426387 893 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AL590399.2-201ENST00000427536 309 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AC137630.2-202ENST00000429681 555 ntTSL 3 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AC005532.1-201ENST00000430266 471 ntTSL 5 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AF127936.1-201ENST00000435315 695 ntTSL 3 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 BMS1P11-201ENST00000442351 885 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 ATP5J2-205ENST00000449683 460 ntTSL 3 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AL162739.1-201ENST00000450606 307 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 BMS1P9-201ENST00000457640 885 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 RPL12P31-201ENST00000478433 450 ntBASIC5.81□□□□□ -1.48
VAPAQ9P0L0 PFN2-209ENST00000481275 560 ntTSL 4 BASIC5.81□□□□□ -1.48
VAPAQ9P0L0 RPL5P33-201ENST00000487833 905 ntBASIC5.81□□□□□ -1.48
Retrieved 100 of 98,524 protein–RNA pairs in 174.9 ms