Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC093510.2-201ENST00000562820 896 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 LINC2194-201ENST00000567127 454 ntTSL 3 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 AC005726.4-201ENST00000582858 458 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 AC124916.2-201ENST00000604416 224 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 BNIP3P31-201ENST00000604515 566 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 AC092902.2-219ENST00000608488 822 ntTSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 AL049777.1-201ENST00000622740 518 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 LINC00216-201ENST00000623548 1126 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 LINC00836-201ENST00000625325 582 ntTSL 4 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 LINC01206-233ENST00000630063 878 ntTSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 CASC19-212ENST00000641153 1287 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 ZNF699-201ENST00000308650 2094 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 ADAMTS3-204ENST00000622135 4479 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 EPS15-203ENST00000371733 5225 ntAPPRIS P2 TSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 ARHGAP21-201ENST00000320481 4343 ntTSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 C11orf54-202ENST00000354421 1733 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 SCRN1-202ENST00000409497 1732 ntAPPRIS P1 TSL 2 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 NEXMIF-203ENST00000616200 10624 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
VTA1Q9NP79 DOCK9-203ENST00000376460 7549 ntAPPRIS P2 TSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 CR1-204ENST00000367052 7469 ntTSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 CR1-205ENST00000367053 7469 ntTSL 5 BASIC7.38□□□□□ -1.23
VTA1Q9NP79 AP002833.3-201ENST00000625075 2265 ntBASIC7.38□□□□□ -1.23
VTA1Q9NP79 UPF2-203ENST00000397053 5369 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 KCNIP4-201ENST00000359001 2168 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VTA1Q9NP79 SH3D19-210ENST00000514152 5107 ntAPPRIS ALT1 TSL 2 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 CRB1-209ENST00000535699 5140 ntTSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 CDH17-203ENST00000450165 2625 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VTA1Q9NP79 MFSD8-217ENST00000641178 4374 ntBASIC7.37□□□□□ -1.23
VTA1Q9NP79 ALS2CR12-203ENST00000405148 2013 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 DNM1L-205ENST00000414834 4211 ntTSL 2 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 NR5A2-206ENST00000544748 4775 ntAPPRIS ALT1 TSL 2 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 UNC13B-210ENST00000636694 8012 ntTSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 TMEM68-219ENST00000617977 4512 ntTSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 CNTRL-207ENST00000373855 7660 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 OR11G2-203ENST00000641879 4415 ntAPPRIS P1 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 PDE4DIP-204ENST00000369351 4922 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VTA1Q9NP79 GATAD2B-204ENST00000634544 2342 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC7.37□□□□□ -1.23
VTA1Q9NP79 PRPS1-202ENST00000372419 628 ntTSL 2 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 GCNT1P4-201ENST00000404096 329 ntBASIC7.37□□□□□ -1.23
VTA1Q9NP79 LINC01031-201ENST00000420807 779 ntTSL 3 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 SFR1P2-201ENST00000421841 730 ntBASIC7.37□□□□□ -1.23
VTA1Q9NP79 AL157400.1-201ENST00000428166 368 ntTSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 ARL5AP3-201ENST00000439327 386 ntBASIC7.37□□□□□ -1.23
VTA1Q9NP79 GTF2IP14-201ENST00000441415 586 ntBASIC7.37□□□□□ -1.23
VTA1Q9NP79 AC017006.2-201ENST00000444077 464 ntTSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 HMGB1P7-201ENST00000450921 612 ntBASIC7.37□□□□□ -1.23
VTA1Q9NP79 AC084211.1-201ENST00000473893 328 ntTSL 2 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 RPL12P24-201ENST00000474907 486 ntBASIC7.37□□□□□ -1.23
VTA1Q9NP79 RN7SKP157-201ENST00000516174 282 ntBASIC7.37□□□□□ -1.23
VTA1Q9NP79 LINC01603-201ENST00000517343 1134 ntTSL 2 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 PRH1-204ENST00000539853 837 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 DCTN5-207ENST00000568272 523 ntTSL 2 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 AP005230.1-204ENST00000579097 779 ntTSL 2 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 AL670729.3-201ENST00000602345 574 ntTSL 4 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 AL356986.1-201ENST00000604085 341 ntBASIC7.37□□□□□ -1.23
VTA1Q9NP79 AL391834.2-201ENST00000609982 546 ntBASIC7.37□□□□□ -1.23
VTA1Q9NP79 MMP2-AS1-203ENST00000620495 625 ntTSL 3 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 AL355480.1-201ENST00000629041 99 ntBASIC7.37□□□□□ -1.23
VTA1Q9NP79 AC107068.2-201ENST00000634611 447 ntTSL 2 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 MTCO1P25-201ENST00000414449 1799 ntBASIC7.37□□□□□ -1.23
VTA1Q9NP79 SENP8-201ENST00000340912 4281 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VTA1Q9NP79 RBMXL1-201ENST00000321792 4799 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VTA1Q9NP79 TRRAP-207ENST00000628380 12644 ntAPPRIS ALT2 TSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 MKL2-201ENST00000318282 8608 ntAPPRIS P3 TSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 DNAH10-210ENST00000638045 13678 ntAPPRIS P2 TSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 DCP1A-206ENST00000610213 5994 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VTA1Q9NP79 HBS1L-206ENST00000415177 2636 ntTSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 CDK12-202ENST00000447079 8336 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
VTA1Q9NP79 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC7.37□□□□□ -1.23
VTA1Q9NP79 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 ARPP21-204ENST00000412048 2506 ntTSL 2 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 FBXW10-203ENST00000395665 3431 ntAPPRIS P3 TSL 1 (best) BASIC7.37□□□□□ -1.23
VTA1Q9NP79 KCNJ10-207ENST00000638868 3883 ntAPPRIS P1 TSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 HMBOX1-206ENST00000519047 1551 ntTSL 5 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 TEK-204ENST00000519097 3836 ntTSL 2 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 LINC01991-202ENST00000446091 1524 ntTSL 2 BASIC7.37□□□□□ -1.23
VTA1Q9NP79 HSPA8P19-201ENST00000505359 1517 ntBASIC7.37□□□□□ -1.23
VTA1Q9NP79 ZNF438-201ENST00000331737 3243 ntAPPRIS ALT2 TSL 1 (best) BASIC7.37□□□□□ -1.23
VTA1Q9NP79 ADAL-203ENST00000428046 3514 ntTSL 2 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 NUF2-202ENST00000367900 1842 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VTA1Q9NP79 ETV1-201ENST00000242066 6348 ntTSL 5 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 CLEC1A-204ENST00000457018 1686 ntAPPRIS ALT2 TSL 2 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 ERVW-1-202ENST00000603053 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VTA1Q9NP79 EMC2-201ENST00000220853 1243 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VTA1Q9NP79 SPANXN3-201ENST00000370503 590 ntAPPRIS P1 TSL 1 (best) BASIC7.36□□□□□ -1.23
VTA1Q9NP79 DHFRP2-201ENST00000414224 547 ntBASIC7.36□□□□□ -1.23
VTA1Q9NP79 LINC01980-201ENST00000414382 543 ntTSL 4 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 AC007179.2-206ENST00000434611 467 ntTSL 3 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 EMC3-AS1-205ENST00000438698 534 ntBASIC7.36□□□□□ -1.23
VTA1Q9NP79 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC7.36□□□□□ -1.23
VTA1Q9NP79 OR52I1-201ENST00000450052 1050 ntBASIC7.36□□□□□ -1.23
VTA1Q9NP79 AL390728.3-201ENST00000452704 270 ntBASIC7.36□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 144.2 ms