Protein–RNA interactions for Protein: Q9HD45

TM9SF3, Transmembrane 9 superfamily member 3, humanhuman

Predictions only

Length 589 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3Q9HD45 RARB-204ENST00000458646 2590 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 LINC02008-201ENST00000470263 1951 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 MCTP2-208ENST00000557742 1957 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 ACPP-202ENST00000351273 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 ANKRD12-201ENST00000262126 11288 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
TM9SF3Q9HD45 LRRC37A16P-202ENST00000586022 3725 ntBASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 LGALS8-204ENST00000352231 1402 ntAPPRIS P4 TSL 2 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 OFD1P8Y-201ENST00000449148 1433 ntBASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 CMAHP-202ENST00000377993 1681 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 RRM1-201ENST00000300738 3076 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 HIPK2-202ENST00000406875 15049 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 OR2M1P-201ENST00000318104 951 ntBASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 RNA5SP188-201ENST00000362916 129 ntBASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 RNA5SP435-201ENST00000364044 108 ntBASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 RANP7-201ENST00000418085 644 ntBASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 NME1P1-201ENST00000420914 382 ntBASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 HTR3E-AS1-201ENST00000431427 515 ntTSL 4 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AL451136.1-201ENST00000435399 325 ntBASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 LINC01291-203ENST00000435984 565 ntTSL 3 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AC013410.1-201ENST00000436223 1232 ntBASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 DCN-205ENST00000441303 519 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AC079612.2-201ENST00000446029 348 ntTSL 2 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 DCN-206ENST00000456569 228 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AC096746.1-201ENST00000501965 1042 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AC098859.2-201ENST00000506232 563 ntTSL 4 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AC020980.1-201ENST00000513041 458 ntTSL 5 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AP002954.1-201ENST00000526274 425 ntTSL 3 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 GLYATL1P2-201ENST00000529451 510 ntTSL 2 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AC092123.1-202ENST00000565310 405 ntTSL 3 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AC139099.3-202ENST00000574856 439 ntTSL 2 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 RN7SL753P-201ENST00000581238 290 ntBASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AL356986.1-201ENST00000604085 341 ntBASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AL359704.2-201ENST00000604335 521 ntBASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 SMAGP-208ENST00000605627 577 ntTSL 5 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 ZNHIT3-208ENST00000619730 926 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AC132825.8-201ENST00000640783 297 ntBASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 IL31RA-202ENST00000354961 2658 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AC010328.1-201ENST00000596769 4060 ntTSL 2 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AP002004.1-203ENST00000531091 1768 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 LINC00284-201ENST00000423211 3208 ntTSL 2 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 MCFD2-202ENST00000409105 4210 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 RAD51B-210ENST00000487270 2596 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 FRYL-202ENST00000358350 11706 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 TANC2-202ENST00000424789 11721 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 AP002370.1-201ENST00000528055 1602 ntBASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 KCNQ3-205ENST00000621976 10659 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
TM9SF3Q9HD45 GRIA2-204ENST00000393815 5260 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 ZNF227-202ENST00000391961 2993 ntTSL 4 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 TTC6-202ENST00000382320 1972 ntTSL 2 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 ZNF253-201ENST00000355650 2268 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AC009120.2-204ENST00000621548 2032 ntBASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 ANGPTL5-201ENST00000334289 2368 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 ZNF542P-202ENST00000467807 3209 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AC009779.8-201ENST00000641684 4384 ntBASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 ZCCHC6-203ENST00000375948 958 ntTSL 2 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 RFPL3S-201ENST00000382084 1117 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AC004386.1-201ENST00000393214 761 ntBASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AL157702.1-201ENST00000398764 426 ntBASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 NUTM2A-AS1-203ENST00000413961 501 ntTSL 3 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AL645936.1-201ENST00000441979 518 ntBASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AC010240.2-201ENST00000445363 1205 ntBASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AC009963.3-201ENST00000458090 486 ntBASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 VAMP3-202ENST00000470357 954 ntTSL 3 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 LDHC-203ENST00000535809 757 ntTSL 5 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 LDHC-205ENST00000537486 583 ntTSL 5 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 PWRN1-207ENST00000565893 818 ntTSL 3 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AC090826.1-203ENST00000569235 490 ntBASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AC137695.1-201ENST00000604126 489 ntBASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AP001437.1-201ENST00000608783 456 ntBASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 MIR6862-1-201ENST00000613016 70 ntBASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 MIR6862-2-201ENST00000614755 70 ntBASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AL133342.1-201ENST00000618168 366 ntTSL 3 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AL354718.1-201ENST00000619764 589 ntBASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 AP000550.3-201ENST00000637734 379 ntBASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 NRG3-208ENST00000556918 1581 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 SELE-203ENST00000367775 3389 ntTSL 5 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 FRS2-209ENST00000550389 6600 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 ADA2-206ENST00000449907 4278 ntAPPRIS ALT2 TSL 2 BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 TRMT10A-202ENST00000394876 1638 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TM9SF3Q9HD45 STMN2-201ENST00000220876 2223 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 91.5 ms