Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 IGHV6-1-201ENST00000390593 415 ntAPPRIS P1 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 NR1I3-208ENST00000412844 989 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 TEX50-201ENST00000417563 821 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 C7orf69-201ENST00000418326 675 ntTSL 4 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 AK3P5-201ENST00000432033 519 ntBASIC6.49□□□□□ -1.37
PCDH9Q9HC56 AC099670.1-201ENST00000455141 783 ntBASIC6.49□□□□□ -1.37
PCDH9Q9HC56 VPS25P1-201ENST00000455691 508 ntBASIC6.49□□□□□ -1.37
PCDH9Q9HC56 L29074.1-201ENST00000456072 534 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 AL355032.1-201ENST00000472981 438 ntBASIC6.49□□□□□ -1.37
PCDH9Q9HC56 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 LDHAP1-201ENST00000509421 992 ntBASIC6.49□□□□□ -1.37
PCDH9Q9HC56 NR1I3-229ENST00000511748 480 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 AC124891.1-201ENST00000536322 519 ntBASIC6.49□□□□□ -1.37
PCDH9Q9HC56 TDGP1-201ENST00000543961 1229 ntBASIC6.49□□□□□ -1.37
PCDH9Q9HC56 AC084033.1-201ENST00000550830 633 ntBASIC6.49□□□□□ -1.37
PCDH9Q9HC56 TPRX1P1-201ENST00000557620 319 ntBASIC6.49□□□□□ -1.37
PCDH9Q9HC56 AC021549.1-201ENST00000580937 433 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 AC005180.2-201ENST00000585620 562 ntTSL 3 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 AC006305.2-201ENST00000589617 552 ntTSL 4 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 AC073046.2-201ENST00000604756 527 ntBASIC6.49□□□□□ -1.37
PCDH9Q9HC56 MIR6813-201ENST00000621638 56 ntBASIC6.49□□□□□ -1.37
PCDH9Q9HC56 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 AC099654.15-201ENST00000639802 509 ntBASIC6.49□□□□□ -1.37
PCDH9Q9HC56 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 ANO4-201ENST00000392977 3509 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 MPP5-204ENST00000555925 5006 ntTSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 DCTN5-201ENST00000300087 11011 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 TPH1-201ENST00000250018 5325 ntAPPRIS P1 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.49□□□□□ -1.37
PCDH9Q9HC56 RXFP1-211ENST00000613319 3771 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AC096921.2-201ENST00000561507 1916 ntBASIC6.48□□□□□ -1.37
PCDH9Q9HC56 MYPN-202ENST00000358913 6013 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 NCOR1-202ENST00000395848 3106 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 CSTF3-201ENST00000323959 2797 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 NAP1L1-227ENST00000618691 13505 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 TAF7L-203ENST00000372907 2341 ntAPPRIS P3 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 IMMTP1-201ENST00000435590 2219 ntBASIC6.48□□□□□ -1.37
PCDH9Q9HC56 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 LAMTOR3-201ENST00000226522 1220 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 CLEC12A-202ENST00000350667 699 ntAPPRIS ALT2 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 RNA5SP485-201ENST00000365053 119 ntBASIC6.48□□□□□ -1.37
PCDH9Q9HC56 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AL133260.1-201ENST00000405720 405 ntBASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AL162400.1-201ENST00000418091 359 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AC015977.1-201ENST00000418887 292 ntBASIC6.48□□□□□ -1.37
PCDH9Q9HC56 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 PPP2R2DP1-201ENST00000420526 637 ntBASIC6.48□□□□□ -1.37
PCDH9Q9HC56 LINC01058-201ENST00000420694 448 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 GTF3AP6-201ENST00000432585 986 ntBASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AL513348.1-201ENST00000435554 440 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AC007278.2-201ENST00000436582 1200 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 LINC01773-201ENST00000437598 787 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AL450003.1-201ENST00000439447 455 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 MIR4435-2HG-209ENST00000441075 704 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 HCG14-201ENST00000444986 413 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AC234771.2-201ENST00000445718 597 ntBASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AC131094.1-201ENST00000506984 490 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AC116345.3-201ENST00000508255 449 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AC004063.1-201ENST00000508358 547 ntTSL 4 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 WDFY3-AS1-201ENST00000510449 493 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AP003100.1-201ENST00000524772 832 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 RPA2P3-201ENST00000533268 770 ntBASIC6.48□□□□□ -1.37
PCDH9Q9HC56 LINC02463-201ENST00000546414 497 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AC090709.1-201ENST00000548384 716 ntTSL 3 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AC027229.1-201ENST00000583887 253 ntBASIC6.48□□□□□ -1.37
PCDH9Q9HC56 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 FAM49B-229ENST00000615041 750 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 MIR7159-201ENST00000620587 66 ntBASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AC003992.1-201ENST00000635364 557 ntBASIC6.48□□□□□ -1.37
PCDH9Q9HC56 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 AC124017.1-201ENST00000508112 1594 ntTSL 5 BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 CCNT2P1-201ENST00000423082 1315 ntBASIC6.48□□□□□ -1.37
PCDH9Q9HC56 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 MDN1-205ENST00000629399 17400 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
PCDH9Q9HC56 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 HDAC1P2-201ENST00000453661 1398 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 AC079753.1-201ENST00000623243 3868 ntBASIC6.47□□□□□ -1.37
PCDH9Q9HC56 SV2B-202ENST00000394232 11279 ntAPPRIS P1 TSL 5 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 TTN-AS1-203ENST00000419746 4592 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 ZNF177-202ENST00000589262 1920 ntAPPRIS ALT2 TSL 2 BASIC6.47□□□□□ -1.37
PCDH9Q9HC56 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 92.3 ms