Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 AC010401.2-201ENST00000575137 4934 ntBASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 AL034546.1-201ENST00000623740 3693 ntBASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 DYDC2-201ENST00000256039 1842 ntAPPRIS P3 TSL 2 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 IFI16-202ENST00000340979 2732 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.08□□□□□ -1.44
CCDC28BQ9BUN5 MSR1-204ENST00000381998 2826 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 OR1A1-203ENST00000641732 3832 ntAPPRIS P1 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 BBOX1-202ENST00000525090 1596 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 FCER1G-201ENST00000289902 591 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 PLAC1-201ENST00000359237 1131 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 U3.52-201ENST00000384034 216 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 DPPA2P2-201ENST00000418220 897 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 LINC01687-203ENST00000420255 897 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AL596268.1-201ENST00000427910 1048 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 IGLV3-4-201ENST00000432300 244 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AL731534.1-201ENST00000434711 269 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 CHCHD4P5-201ENST00000436684 427 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 RPL5P25-201ENST00000441148 775 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AL121578.2-201ENST00000448797 447 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AC104233.1-201ENST00000458107 339 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 PFN2-213ENST00000494827 793 ntTSL 4 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 RPL10P7-201ENST00000495649 625 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 CCDC169-211ENST00000503173 837 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AC018607.1-201ENST00000518552 673 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 OR4A43P-201ENST00000532938 908 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AP001107.4-201ENST00000533576 539 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AC009729.1-201ENST00000548873 1133 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AL158058.1-201ENST00000549515 647 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 TPRX1P1-201ENST00000557620 319 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 HNRNPA1P74-201ENST00000560782 835 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AC010503.3-201ENST00000594355 540 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AL589863.1-201ENST00000595383 631 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AL596325.2-201ENST00000609669 505 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AC007347.2-201ENST00000623044 180 ntBASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 CHEK1-216ENST00000534070 3513 ntAPPRIS P1 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 PHTF2-207ENST00000424760 1977 ntTSL 2 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 ASAH2-203ENST00000443575 1942 ntTSL 5 BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 AC007878.1-201ENST00000434786 1615 ntTSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 ZNF610-208ENST00000613461 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC6.07□□□□□ -1.44
CCDC28BQ9BUN5 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 FAM229B-201ENST00000368656 2543 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 KDM4C-214ENST00000536108 3406 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 LINC01581-202ENST00000558874 3173 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 USP37-205ENST00000454775 5019 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 CPS1-212ENST00000619804 1542 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 AASDH-210ENST00000602986 3480 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 ZNF616-204ENST00000600228 4335 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 AL359091.1-201ENST00000449048 1734 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 RNA5SP382-201ENST00000363355 112 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 SNORD35A-201ENST00000363389 86 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 RNA5SP140-201ENST00000364524 92 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 HOPX-204ENST00000381260 1141 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 AC226101.1-201ENST00000401483 387 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 EEF1GP6-201ENST00000402309 905 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 RN7SKP30-201ENST00000411373 334 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 AC073188.3-201ENST00000425228 339 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 RBMY2JP-201ENST00000425544 1059 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 AC104457.2-201ENST00000446055 467 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 HRAT17-202ENST00000451962 687 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 AC012123.2-201ENST00000485809 248 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 AC245088.1-201ENST00000486508 384 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 AC097460.2-201ENST00000511857 741 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 RN7SKP196-201ENST00000516267 345 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 OR8Q1P-201ENST00000526467 655 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 NF1P12-201ENST00000549593 583 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 LINC01146-206ENST00000556684 361 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 AL049779.3-201ENST00000557141 606 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 AC007950.1-201ENST00000560465 615 ntTSL 3 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 RN7SL311P-201ENST00000579858 306 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 AP001381.1-201ENST00000584109 534 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 AC020916.2-201ENST00000591242 360 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 RPS4XP16-202ENST00000595905 807 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 AC004805.3-201ENST00000603178 310 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 PROX1-AS1-219ENST00000610094 791 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 LINC02495-203ENST00000636704 242 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 OR7A1P-202ENST00000641542 1158 ntBASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 AF121898.1-201ENST00000440763 1860 ntTSL 5 BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 MECOM-201ENST00000264674 4900 ntTSL 1 (best) BASIC6.06□□□□□ -1.44
CCDC28BQ9BUN5 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC6.06□□□□□ -1.44
Retrieved 100 of 98,524 protein–RNA pairs in 72.2 ms