Protein–RNA interactions for Protein: Q96P44

COL21A1, Collagen alpha-1(XXI) chain, humanhuman

Predictions only

Length 957 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1Q96P44 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 PIH1D3-201ENST00000336387 993 ntAPPRIS P1 TSL 5 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL21A1Q96P44 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 CAV1-204ENST00000393470 598 ntTSL 4 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 RPL23AP17-201ENST00000401064 499 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 RN7SKP281-201ENST00000410472 352 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 RN7SKP38-201ENST00000410782 309 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 LINC01811-201ENST00000415991 594 ntTSL 5 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 AC004012.1-201ENST00000416593 534 ntTSL 4 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 AL031846.1-202ENST00000424436 592 ntTSL 2 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 AC093151.2-201ENST00000429109 394 ntTSL 3 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 GAPDHP34-201ENST00000432112 823 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 GTF3AP6-201ENST00000432585 986 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 MED28P4-201ENST00000433137 572 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 HBBP1-202ENST00000454892 455 ntTSL 2 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 AC103563.5-201ENST00000455643 364 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 RPS7P10-201ENST00000464254 603 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 CT45A5-201ENST00000487941 1161 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 USP17L23-201ENST00000506619 551 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 IGKV2-19-201ENST00000518132 283 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 COX6B1P4-201ENST00000519826 484 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 AP002336.3-201ENST00000526017 367 ntTSL 3 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 AL133399.1-201ENST00000527476 298 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 ST3GAL3-232ENST00000531451 420 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL21A1Q96P44 LINC00944-204ENST00000544499 366 ntTSL 5 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 LINC00640-204ENST00000557295 708 ntTSL 5 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 AC116158.2-201ENST00000559544 553 ntTSL 4 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 AC009120.3-201ENST00000563335 499 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 AC009054.1-201ENST00000568140 427 ntTSL 3 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 RAB27A-212ENST00000569493 1013 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
COL21A1Q96P44 AL133410.1-201ENST00000574939 546 ntTSL 3 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 MIR7515HG-235ENST00000590865 918 ntTSL 5 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 AC091769.2-201ENST00000605385 479 ntTSL 4 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 AL008723.3-201ENST00000608926 449 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 AC089999.3-201ENST00000622440 577 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 AC022726.2-201ENST00000634673 547 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 KIAA2012-205ENST00000541917 3543 ntAPPRIS P2 TSL 5 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 SHQ1P1-201ENST00000437111 1544 ntBASIC5.93□□□□□ -1.46
COL21A1Q96P44 OR5AS1-202ENST00000641320 7860 ntAPPRIS P1 BASIC5.93□□□□□ -1.46
COL21A1Q96P44 CUL4B-204ENST00000404115 3264 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
COL21A1Q96P44 ENTPD1-201ENST00000371205 2035 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL21A1Q96P44 NCOA4P2-201ENST00000340589 1813 ntBASIC5.92□□□□□ -1.46
COL21A1Q96P44 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL21A1Q96P44 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 ZNF546-201ENST00000347077 7987 ntAPPRIS P3 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL21A1Q96P44 GABRG2-228ENST00000640985 3086 ntTSL 5 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 PLCB4-201ENST00000278655 5430 ntAPPRIS ALT1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL21A1Q96P44 ACTR3C-201ENST00000252071 1218 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL21A1Q96P44 SNORD16-201ENST00000362803 99 ntBASIC5.92□□□□□ -1.46
COL21A1Q96P44 SNORD35A-201ENST00000363389 86 ntBASIC5.92□□□□□ -1.46
COL21A1Q96P44 RN7SKP146-201ENST00000410242 334 ntBASIC5.92□□□□□ -1.46
COL21A1Q96P44 AC106900.1-201ENST00000418620 456 ntTSL 5 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 AL158832.1-201ENST00000429661 406 ntTSL 3 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 AKR1D1-203ENST00000432161 1236 ntTSL 2 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 OR13K1P-201ENST00000444577 975 ntBASIC5.92□□□□□ -1.46
COL21A1Q96P44 AL022237.1-201ENST00000446663 358 ntBASIC5.92□□□□□ -1.46
COL21A1Q96P44 AL158835.1-204ENST00000449693 371 ntTSL 3 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 AL355032.1-201ENST00000472981 438 ntBASIC5.92□□□□□ -1.46
COL21A1Q96P44 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.92□□□□□ -1.46
COL21A1Q96P44 DEFB134-202ENST00000526438 1068 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL21A1Q96P44 AC135983.3-201ENST00000528049 1226 ntBASIC5.92□□□□□ -1.46
COL21A1Q96P44 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 BTG1P1-201ENST00000540396 508 ntBASIC5.92□□□□□ -1.46
COL21A1Q96P44 AL138974.1-201ENST00000551227 741 ntTSL 5 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 TPRX1P1-201ENST00000557620 319 ntBASIC5.92□□□□□ -1.46
COL21A1Q96P44 OR4H6P-201ENST00000563771 921 ntBASIC5.92□□□□□ -1.46
COL21A1Q96P44 C16orf97-205ENST00000568524 406 ntTSL 5 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 AC243960.3-202ENST00000599770 594 ntTSL 4 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 NDUFB9P1-201ENST00000604683 510 ntBASIC5.92□□□□□ -1.46
COL21A1Q96P44 BPIFA4P-204ENST00000605211 656 ntTSL 2 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 AC015819.1-201ENST00000613588 663 ntBASIC5.92□□□□□ -1.46
COL21A1Q96P44 ZNF138-206ENST00000440598 2230 ntTSL 2 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 DAOA-AS1-201ENST00000448407 2482 ntTSL 2 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 ARIH1-201ENST00000379887 21681 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL21A1Q96P44 FASTKD1-204ENST00000453153 2967 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.46
COL21A1Q96P44 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 Z95114.1-201ENST00000624264 14574 ntBASIC5.92□□□□□ -1.46
COL21A1Q96P44 CLASP2-205ENST00000461133 4814 ntTSL 5 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 PLCB1-202ENST00000378637 3864 ntTSL 1 (best) BASIC5.92□□□□□ -1.46
COL21A1Q96P44 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 TLR10-208ENST00000622002 3673 ntAPPRIS P1 TSL 3 BASIC5.92□□□□□ -1.46
COL21A1Q96P44 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL21A1Q96P44 LINC01722-201ENST00000456265 3033 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL21A1Q96P44 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL21A1Q96P44 ZNF101P1-201ENST00000435701 1720 ntBASIC5.91□□□□□ -1.46
COL21A1Q96P44 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.91□□□□□ -1.46
COL21A1Q96P44 LINC02141-201ENST00000568279 6586 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL21A1Q96P44 SLC2A14-221ENST00000616981 3366 ntAPPRIS P3 TSL 5 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.91□□□□□ -1.46
COL21A1Q96P44 LINC01822-201ENST00000435682 2098 ntTSL 2 BASIC5.91□□□□□ -1.46
COL21A1Q96P44 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC5.91□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 104.5 ms