Protein–RNA interactions for Protein: Q969F9

HPS3, Hermansky-Pudlak syndrome 3 protein, humanhuman

Predictions only

Length 1,004 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3Q969F9 NFIB-204ENST00000380953 2381 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HPS3Q969F9 DNAJC28-202ENST00000381947 1354 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
HPS3Q969F9 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
HPS3Q969F9 OR7D4-202ENST00000641244 4968 ntAPPRIS P1 BASIC7.18□□□□□ -1.26
HPS3Q969F9 AC006600.2-201ENST00000624834 2506 ntBASIC7.18□□□□□ -1.26
HPS3Q969F9 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC7.18□□□□□ -1.26
HPS3Q969F9 BPIFC-204ENST00000534972 1809 ntTSL 5 BASIC7.17□□□□□ -1.26
HPS3Q969F9 HMG20A-201ENST00000336216 4046 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 CUL4AP1-201ENST00000514750 1863 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 CCDC125-202ENST00000396496 4198 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
HPS3Q969F9 NFIA-204ENST00000371187 2683 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 C5orf24-201ENST00000338051 4270 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 AL035665.1-201ENST00000428495 1669 ntTSL 3 BASIC7.17□□□□□ -1.26
HPS3Q969F9 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 RNA5SP188-201ENST00000362916 129 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 RNA5SP85-201ENST00000365378 119 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 MIR551B-201ENST00000384984 96 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 AL033519.1-201ENST00000407266 307 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 SNORA11.5-201ENST00000408163 128 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 RPL23AP85-201ENST00000421838 433 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 ARAFP1-201ENST00000422172 605 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC7.17□□□□□ -1.26
HPS3Q969F9 AL356121.1-201ENST00000442911 156 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 FAM155A-IT1-201ENST00000449551 819 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 RARRES2P3-201ENST00000457739 473 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 AC078785.1-205ENST00000491578 482 ntTSL 4 BASIC7.17□□□□□ -1.26
HPS3Q969F9 AC091860.2-201ENST00000509423 941 ntTSL 2 BASIC7.17□□□□□ -1.26
HPS3Q969F9 AC093763.1-201ENST00000512464 699 ntTSL 3 BASIC7.17□□□□□ -1.26
HPS3Q969F9 AC025524.2-211ENST00000519990 1173 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 NAV2-IT1-201ENST00000528204 506 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 PATE4-203ENST00000534411 897 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 AC073916.1-201ENST00000545095 130 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 MGAT4C-206ENST00000552435 550 ntTSL 4 BASIC7.17□□□□□ -1.26
HPS3Q969F9 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC7.17□□□□□ -1.26
HPS3Q969F9 AC244034.2-201ENST00000562504 509 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 MIR4301-201ENST00000577203 66 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC7.17□□□□□ -1.26
HPS3Q969F9 AC036176.3-201ENST00000602456 418 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 LINC00632-204ENST00000602830 597 ntTSL 4 BASIC7.17□□□□□ -1.26
HPS3Q969F9 AC068726.1-201ENST00000610993 341 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 AC084824.5-201ENST00000612009 413 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 MIR6885-201ENST00000612241 66 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 SMR3B-204ENST00000614072 783 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 PCBP1-AS1-286ENST00000625888 765 ntTSL 5 BASIC7.17□□□□□ -1.26
HPS3Q969F9 AL450990.1-201ENST00000632868 582 ntTSL 4 BASIC7.17□□□□□ -1.26
HPS3Q969F9 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HPS3Q969F9 IGIP-201ENST00000333305 3458 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
HPS3Q969F9 MTO1-202ENST00000370305 2174 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 GOLGB1-202ENST00000393667 11198 ntAPPRIS ALT2 TSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 TRPC1-205ENST00000612385 3620 ntAPPRIS P3 TSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
HPS3Q969F9 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
HPS3Q969F9 CASP5-201ENST00000260315 1414 ntTSL 5 BASIC7.17□□□□□ -1.26
HPS3Q969F9 RBPJP6-201ENST00000411556 1431 ntBASIC7.17□□□□□ -1.26
HPS3Q969F9 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
HPS3Q969F9 MUC5AC-201ENST00000621226 17448 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
HPS3Q969F9 DCLK1-208ENST00000615680 7592 ntTSL 2 BASIC7.16□□□□□ -1.26
HPS3Q969F9 AC099673.1-201ENST00000452199 2296 ntTSL 2 BASIC7.16□□□□□ -1.26
HPS3Q969F9 ZNF484-202ENST00000375495 2867 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
HPS3Q969F9 ADNP-202ENST00000371602 6115 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HPS3Q969F9 PSG5-210ENST00000599812 1884 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HPS3Q969F9 ZRANB3-210ENST00000536680 6943 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HPS3Q969F9 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HPS3Q969F9 ATP6V1G3-201ENST00000281087 630 ntAPPRIS P1 TSL 5 BASIC7.16□□□□□ -1.26
HPS3Q969F9 ATP6V1G3-202ENST00000309309 678 ntTSL 5 BASIC7.16□□□□□ -1.26
HPS3Q969F9 C1orf162-201ENST00000343534 1107 ntAPPRIS P3 TSL 1 (best) BASIC7.16□□□□□ -1.26
HPS3Q969F9 SNORA27.3-201ENST00000364937 134 ntBASIC7.16□□□□□ -1.26
HPS3Q969F9 C2orf88-202ENST00000396974 998 ntAPPRIS P1 TSL 2 BASIC7.16□□□□□ -1.26
HPS3Q969F9 UBTFL2-201ENST00000411859 1191 ntBASIC7.16□□□□□ -1.26
HPS3Q969F9 AC079630.1-201ENST00000412812 585 ntTSL 4 BASIC7.16□□□□□ -1.26
HPS3Q969F9 AL035401.1-201ENST00000420572 871 ntTSL 3 BASIC7.16□□□□□ -1.26
HPS3Q969F9 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC7.16□□□□□ -1.26
HPS3Q969F9 AC083862.1-201ENST00000427378 1242 ntBASIC7.16□□□□□ -1.26
HPS3Q969F9 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC7.16□□□□□ -1.26
HPS3Q969F9 AL022324.2-201ENST00000434827 780 ntBASIC7.16□□□□□ -1.26
HPS3Q969F9 VN1R48P-201ENST00000448149 1036 ntBASIC7.16□□□□□ -1.26
HPS3Q969F9 SPANXB1-201ENST00000449283 469 ntAPPRIS P1 TSL 1 (best) BASIC7.16□□□□□ -1.26
HPS3Q969F9 AC074286.1-201ENST00000452002 544 ntTSL 4 BASIC7.16□□□□□ -1.26
HPS3Q969F9 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC7.16□□□□□ -1.26
HPS3Q969F9 NPM1P28-201ENST00000492269 840 ntBASIC7.16□□□□□ -1.26
HPS3Q969F9 AC091868.2-201ENST00000506717 556 ntTSL 3 BASIC7.16□□□□□ -1.26
HPS3Q969F9 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC7.16□□□□□ -1.26
HPS3Q969F9 MINOS1P4-201ENST00000515470 318 ntBASIC7.16□□□□□ -1.26
HPS3Q969F9 LINC02237-201ENST00000521753 805 ntTSL 3 BASIC7.16□□□□□ -1.26
HPS3Q969F9 KCTD9P4-201ENST00000526766 1166 ntBASIC7.16□□□□□ -1.26
HPS3Q969F9 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC7.16□□□□□ -1.26
HPS3Q969F9 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC7.16□□□□□ -1.26
HPS3Q969F9 AC005832.1-201ENST00000544380 572 ntTSL 4 BASIC7.16□□□□□ -1.26
HPS3Q969F9 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC7.16□□□□□ -1.26
HPS3Q969F9 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC7.16□□□□□ -1.26
HPS3Q969F9 RPARP-AS1-204ENST00000594818 445 ntTSL 3 BASIC7.16□□□□□ -1.26
HPS3Q969F9 AC011497.2-201ENST00000600255 639 ntBASIC7.16□□□□□ -1.26
HPS3Q969F9 AC073046.2-201ENST00000604756 527 ntBASIC7.16□□□□□ -1.26
HPS3Q969F9 AL683813.2-201ENST00000605245 502 ntBASIC7.16□□□□□ -1.26
HPS3Q969F9 AC019257.2-201ENST00000605539 497 ntBASIC7.16□□□□□ -1.26
HPS3Q969F9 AC135803.1-201ENST00000608748 565 ntBASIC7.16□□□□□ -1.26
HPS3Q969F9 AC024255.1-201ENST00000614376 102 ntBASIC7.16□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 87.2 ms