Protein–RNA interactions for Protein: Q92889

ERCC4, DNA repair endonuclease XPF, humanhuman

Predicted RBP Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC4Q92889 GLYATL1P1-201ENST00000528297 1607 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 ERCC6L-202ENST00000373657 4344 ntAPPRIS ALT2 TSL 2 BASIC7.41□□□□□ -1.22
ERCC4Q92889 PRKAR1A-204ENST00000536854 3697 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC4Q92889 BTK-209ENST00000618050 2417 ntTSL 5 BASIC7.41□□□□□ -1.22
ERCC4Q92889 EMSY-201ENST00000334736 5508 ntAPPRIS P3 TSL 5 BASIC7.41□□□□□ -1.22
ERCC4Q92889 AL359263.1-201ENST00000441188 2796 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 LUZP2-201ENST00000336930 3553 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC4Q92889 TRPM7-201ENST00000313478 10400 ntAPPRIS P3 TSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC4Q92889 DAPL1-201ENST00000309950 552 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC4Q92889 OR52D1-201ENST00000322641 1065 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
ERCC4Q92889 OR51M1-201ENST00000328611 1058 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
ERCC4Q92889 OR11H13P-201ENST00000359695 979 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 SNORA63.3-201ENST00000362682 132 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 AL451142.1-201ENST00000375867 775 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 MIR187-201ENST00000385062 109 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 UGT1A6-203ENST00000406651 785 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC4Q92889 DAPL1-203ENST00000409042 544 ntTSL 4 BASIC7.41□□□□□ -1.22
ERCC4Q92889 AC099566.1-204ENST00000413825 943 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC4Q92889 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC4Q92889 AC007349.3-201ENST00000415356 872 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC4Q92889 VN1R37P-201ENST00000419096 748 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 AL162582.1-201ENST00000419196 467 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC4Q92889 AC091492.1-201ENST00000419844 272 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 AL391069.1-201ENST00000422153 358 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC4Q92889 AL160275.1-201ENST00000423632 476 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
ERCC4Q92889 AC017019.1-201ENST00000426129 261 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 AC097721.1-201ENST00000427150 1253 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 AC096677.2-201ENST00000430471 598 ntTSL 5 BASIC7.41□□□□□ -1.22
ERCC4Q92889 AC019211.1-201ENST00000432993 754 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC4Q92889 MRPS33P4-201ENST00000434892 317 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 Z80107.1-201ENST00000436830 412 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 AL021937.4-201ENST00000444848 444 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC4Q92889 AL122008.4-201ENST00000446433 388 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC4Q92889 MORF4L1P4-201ENST00000450245 976 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 AC026391.1-201ENST00000450677 537 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC4Q92889 RPS3AP53-201ENST00000454716 778 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 RPSAP24-201ENST00000461543 873 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 RPS26P11-201ENST00000463445 348 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 RPS26P6-201ENST00000475156 348 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 RPL7AP30-201ENST00000482859 796 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 AF305872.1-201ENST00000485217 471 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 LINC01612-201ENST00000504509 469 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC4Q92889 C5orf64-204ENST00000507461 535 ntTSL 4 BASIC7.41□□□□□ -1.22
ERCC4Q92889 AC091849.1-201ENST00000509920 121 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 LINC01950-202ENST00000513273 572 ntTSL 2 BASIC7.41□□□□□ -1.22
ERCC4Q92889 AC113423.2-201ENST00000517582 545 ntTSL 2 BASIC7.41□□□□□ -1.22
ERCC4Q92889 AC008662.1-201ENST00000521805 674 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC4Q92889 AC084026.1-201ENST00000522028 564 ntTSL 4 BASIC7.41□□□□□ -1.22
ERCC4Q92889 PCED1B-AS1-202ENST00000547600 523 ntTSL 3 BASIC7.41□□□□□ -1.22
ERCC4Q92889 OR11H12-201ENST00000550708 1085 ntAPPRIS P1 BASIC7.41□□□□□ -1.22
ERCC4Q92889 AC023080.1-201ENST00000551663 931 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 AL445383.1-201ENST00000554689 874 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 SLC25A3P1-203ENST00000563752 460 ntTSL 2 BASIC7.41□□□□□ -1.22
ERCC4Q92889 AL049840.5-201ENST00000602827 552 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 BUB1P1-201ENST00000603541 607 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 AC245407.2-201ENST00000614199 451 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 DAPL1-204ENST00000621326 671 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC4Q92889 AP006248.3-201ENST00000623580 594 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC4Q92889 EEF1A1P24-201ENST00000451469 1378 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC4Q92889 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC4Q92889 EEF1A1P28-201ENST00000450915 1403 ntBASIC7.41□□□□□ -1.22
ERCC4Q92889 ADAL-201ENST00000389651 1559 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC4Q92889 LINC01505-203ENST00000435485 1686 ntTSL 5 BASIC7.41□□□□□ -1.22
ERCC4Q92889 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC7.41□□□□□ -1.22
ERCC4Q92889 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC4Q92889 LINC00891-201ENST00000627173 4113 ntTSL 2 BASIC7.41□□□□□ -1.22
ERCC4Q92889 CNTN1-204ENST00000547849 3125 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
ERCC4Q92889 PCDH15-202ENST00000361849 7017 ntTSL 5 BASIC7.4□□□□□ -1.22
ERCC4Q92889 PCDH15-205ENST00000373957 7032 ntTSL 5 BASIC7.4□□□□□ -1.22
ERCC4Q92889 ENTPD1-AS1-212ENST00000458228 3274 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC4Q92889 LINC01527-201ENST00000419578 1997 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC4Q92889 DDX4-211ENST00000511853 1984 ntTSL 2 BASIC7.4□□□□□ -1.22
ERCC4Q92889 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC4Q92889 FAM161A-202ENST00000404929 3762 ntAPPRIS ALT2 TSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC4Q92889 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC7.4□□□□□ -1.22
ERCC4Q92889 RAB3B-201ENST00000371655 12844 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC4Q92889 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC4Q92889 SLC25A30-204ENST00000519676 3670 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC4Q92889 MS4A12-201ENST00000016913 1167 ntAPPRIS P1 TSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC4Q92889 DNAH14-203ENST00000366848 929 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
ERCC4Q92889 AP000812.1-201ENST00000378140 477 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC4Q92889 CAPSL-201ENST00000397366 969 ntAPPRIS P1 TSL 3 BASIC7.4□□□□□ -1.22
ERCC4Q92889 ATP6V1E1-203ENST00000399798 994 ntTSL 2 BASIC7.4□□□□□ -1.22
ERCC4Q92889 RN7SKP296-201ENST00000411185 341 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 AC024937.2-201ENST00000411669 1242 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC7.4□□□□□ -1.22
ERCC4Q92889 RPL23AP18-201ENST00000416139 468 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 AL606804.1-201ENST00000435333 538 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC4Q92889 AL590399.4-201ENST00000436561 601 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 AL022157.1-201ENST00000439622 665 ntTSL 2 BASIC7.4□□□□□ -1.22
ERCC4Q92889 AC008080.4-202ENST00000440034 1005 ntTSL 3 BASIC7.4□□□□□ -1.22
ERCC4Q92889 AL606490.8-201ENST00000441624 319 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 RPS7P4-201ENST00000444127 582 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 AC092106.1-201ENST00000444291 373 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 AC013733.1-201ENST00000449835 985 ntTSL 4 BASIC7.4□□□□□ -1.22
ERCC4Q92889 AL355314.1-201ENST00000453639 316 ntTSL 5 BASIC7.4□□□□□ -1.22
ERCC4Q92889 CCNJP2-201ENST00000457810 1163 ntBASIC7.4□□□□□ -1.22
ERCC4Q92889 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
Retrieved 100 of 98,524 protein–RNA pairs in 107.1 ms