Protein–RNA interactions for Protein: Q8WWL7

CCNB3, G2/mitotic-specific cyclin-B3, humanhuman

Predictions only

Length 1,395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNB3Q8WWL7 ADA2-210ENST00000610390 4137 ntTSL 5 BASIC9.51□□□□□ -0.89
CCNB3Q8WWL7 NPHP3-AS1-202ENST00000504440 2507 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CCNB3Q8WWL7 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC9.51□□□□□ -0.89
CCNB3Q8WWL7 ZNF718-201ENST00000510175 3495 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CCNB3Q8WWL7 AL591848.4-201ENST00000567832 3472 ntBASIC9.51□□□□□ -0.89
CCNB3Q8WWL7 INTS2-207ENST00000617492 5805 ntTSL 5 BASIC9.51□□□□□ -0.89
CCNB3Q8WWL7 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CCNB3Q8WWL7 DDAH1-204ENST00000535924 3909 ntTSL 1 (best) BASIC9.51□□□□□ -0.89
CCNB3Q8WWL7 ZNF160-202ENST00000418871 4219 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CCNB3Q8WWL7 AKAP5-202ENST00000394718 6487 ntAPPRIS P1 TSL 1 (best) BASIC9.51□□□□□ -0.89
CCNB3Q8WWL7 MTCO1P11-201ENST00000429111 1528 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC012213.2-201ENST00000562917 4597 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 CD84-201ENST00000311224 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 RNA5SP478-201ENST00000364657 115 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 MIR1203-201ENST00000408812 85 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 RPL35AP31-201ENST00000418340 337 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 BX284632.2-201ENST00000421091 399 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC079355.1-201ENST00000421770 223 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 ICA1L-210ENST00000425178 879 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 HNRNPA1P18-201ENST00000433537 927 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AL512605.1-202ENST00000441919 381 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AL359955.2-201ENST00000445380 353 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC025031.1-201ENST00000552634 562 ntTSL 4 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AL133240.1-201ENST00000553537 580 ntTSL 4 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC008555.7-201ENST00000605008 583 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC079298.3-203ENST00000623269 555 ntTSL 3 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 OR7A1P-202ENST00000641542 1158 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC092692.1-201ENST00000623625 2595 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 RPGRIP1L-206ENST00000564374 3877 ntTSL 2 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 SLC12A6-201ENST00000290209 7286 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC006213.6-201ENST00000623722 4179 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 LGSN-204ENST00000622415 1612 ntTSL 2 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 IL16-204ENST00000394660 9616 ntAPPRIS ALT2 TSL 2 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 SSR1-201ENST00000244763 9669 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 LMO7-202ENST00000341547 7237 ntAPPRIS P3 TSL 1 (best) BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC016831.1-201ENST00000432045 6411 ntTSL 2 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 IQCJ-SCHIP1-205ENST00000527095 1410 ntAPPRIS ALT2 TSL 5 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 SIPA1L1-202ENST00000381232 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 MBNL2-203ENST00000376673 4632 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 LIPA-203ENST00000371837 2513 ntTSL 2 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 DCP2-201ENST00000389063 8947 ntAPPRIS P1 TSL 1 (best) BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC011754.1-201ENST00000415201 491 ntTSL 5 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AL354824.1-201ENST00000424931 349 ntTSL 3 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AL161636.2-201ENST00000445179 927 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 CT45A11P-201ENST00000448043 1134 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AL590399.3-202ENST00000448491 495 ntTSL 5 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 RN7SL165P-201ENST00000477476 291 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 MITF-217ENST00000531774 1074 ntTSL 1 (best) BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC008794.2-201ENST00000587779 293 ntTSL 2 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC011990.1-201ENST00000592809 734 ntTSL 3 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC011497.2-201ENST00000600255 639 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AC126175.1-201ENST00000617041 758 ntBASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 AL357060.1-201ENST00000638039 977 ntTSL 5 BASIC9.5□□□□□ -0.89
CCNB3Q8WWL7 VTCN1-202ENST00000359008 2581 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 PAK5-201ENST00000353224 4500 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 GRIP1-202ENST00000398016 4888 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 SNW1-204ENST00000554775 1687 ntTSL 5 BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 RAG1-201ENST00000299440 6564 ntAPPRIS P1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 LRRIQ3-201ENST00000354431 2849 ntAPPRIS P2 TSL 5 BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 NUDT13-206ENST00000537969 2151 ntTSL 2 BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 FOXM1-202ENST00000359843 3315 ntAPPRIS P4 TSL 1 (best) BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 RAB30-214ENST00000534141 3746 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 RBM48-202ENST00000481551 4093 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 CD200R1-201ENST00000295863 1692 ntTSL 2 BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 OR4D5-201ENST00000307033 1095 ntAPPRIS P1 BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 RPS24-201ENST00000360830 514 ntAPPRIS ALT1 TSL 1 (best) BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 AL022337.1-201ENST00000434510 357 ntTSL 3 BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 CCDC17-203ENST00000445048 443 ntAPPRIS ALT2 TSL 1 (best) BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 AL359265.3-201ENST00000456125 579 ntTSL 5 BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 CASC21-201ENST00000521586 290 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 AP003037.1-201ENST00000537594 267 ntTSL 5 BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 AC092865.1-201ENST00000544395 1023 ntBASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 AC027808.1-201ENST00000560873 683 ntTSL 3 BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 LINC00921-201ENST00000572123 243 ntTSL 5 BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 AC020909.2-201ENST00000595005 626 ntTSL 2 BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 UBE2E3-208ENST00000602632 446 ntTSL 2 BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 AC024589.2-201ENST00000605642 1294 ntBASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 TMEM75-201ENST00000624314 2165 ntBASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 ADGRL3-207ENST00000507625 4843 ntAPPRIS ALT2 TSL 5 BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC9.49□□□□□ -0.89
CCNB3Q8WWL7 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
CCNB3Q8WWL7 HDAC1P2-201ENST00000453661 1398 ntBASIC9.48□□□□□ -0.89
CCNB3Q8WWL7 RGS4-203ENST00000367909 3200 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CCNB3Q8WWL7 PDE4DIP-206ENST00000369356 8307 ntAPPRIS P4 TSL 1 (best) BASIC9.48□□□□□ -0.89
CCNB3Q8WWL7 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
CCNB3Q8WWL7 ESRRG-203ENST00000361395 5216 ntAPPRIS P1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CCNB3Q8WWL7 ESRRG-209ENST00000408911 5216 ntTSL 1 (best) BASIC9.48□□□□□ -0.89
CCNB3Q8WWL7 ITPR1-204ENST00000443694 9513 ntAPPRIS ALT1 TSL 1 (best) BASIC9.48□□□□□ -0.89
CCNB3Q8WWL7 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC9.48□□□□□ -0.89
CCNB3Q8WWL7 ATF7IP-222ENST00000544627 4847 ntAPPRIS ALT2 TSL 1 (best) BASIC9.48□□□□□ -0.89
Retrieved 100 of 98,524 protein–RNA pairs in 85.8 ms