Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 AL359962.1-201ENST00000417969 303 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 AL139184.1-202ENST00000422303 222 ntBASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 AL589794.1-201ENST00000424971 390 ntBASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 SUMO2P8-201ENST00000434672 286 ntBASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 AL035701.1-202ENST00000437249 371 ntTSL 3 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 PPIA-203ENST00000451562 544 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 RPL19P11-201ENST00000495944 589 ntBASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 MRPL57P6-201ENST00000506570 309 ntBASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 TAS2R50-201ENST00000506868 1000 ntAPPRIS P1 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 AC010442.1-201ENST00000515583 816 ntBASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 OPCML-IT2-201ENST00000533260 398 ntTSL 4 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 AC009145.2-201ENST00000562685 377 ntTSL 3 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 AC010266.1-201ENST00000568962 442 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 CCL2-202ENST00000580907 736 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 HNRNPA3P9-201ENST00000604913 979 ntBASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 AC004890.3-201ENST00000605566 1095 ntBASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 BACH1-IT2-202ENST00000608072 691 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 CCL15-204ENST00000617897 1073 ntAPPRIS P2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 RBPJP6-201ENST00000411556 1431 ntBASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 NAT1-209ENST00000541942 1948 ntAPPRIS P1 TSL 3 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 TPK1-207ENST00000538212 2243 ntTSL 2 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 AL355488.2-201ENST00000609909 2850 ntBASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 IL21-AS1-201ENST00000417927 3748 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 VEZT-204ENST00000436874 4562 ntAPPRIS P1 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 ARHGAP20-204ENST00000528829 5880 ntAPPRIS ALT2 TSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.89□□□□□ -1.31
CCDC112Q8NEF3 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 PSD3-219ENST00000614430 6136 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 SP110-204ENST00000392048 1937 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 AL606516.1-201ENST00000455438 1861 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 HIF1AN-201ENST00000299163 13011 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 OR7A10-202ENST00000641129 1847 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 OR2A3P-202ENST00000641249 1776 ntBASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 FCRL5-202ENST00000368189 4424 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 ZNF506-201ENST00000443905 4095 ntAPPRIS P3 TSL 2 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 DPH5-203ENST00000370109 1316 ntAPPRIS P4 TSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 CASP5-208ENST00000526056 1344 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 C3orf14-201ENST00000232519 690 ntAPPRIS P1 TSL 3 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 OR6P1-201ENST00000334632 954 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 ZNF669-202ENST00000366500 489 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 RSPO3-202ENST00000368317 1290 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 PRR9-201ENST00000368744 1229 ntAPPRIS P1 TSL 5 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 RPLP1P10-201ENST00000413972 339 ntBASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 AL358394.1-201ENST00000422807 535 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 RPL7AP14-201ENST00000424041 802 ntBASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 AC005008.2-201ENST00000431501 715 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 AL022324.2-201ENST00000434827 780 ntBASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 AL845321.1-201ENST00000444603 348 ntBASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 UBBP5-201ENST00000446970 266 ntBASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 WDR11-AS1-201ENST00000451706 1108 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 VPS25P1-201ENST00000455691 508 ntBASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 AC010168.1-201ENST00000501178 657 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 AC139491.5-201ENST00000510029 920 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 CARSP2-201ENST00000520688 277 ntBASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 AL355075.1-201ENST00000528210 468 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 RAB30-209ENST00000532548 644 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 RPA2P3-201ENST00000533268 770 ntBASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 SLC14A1-206ENST00000535474 1048 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 AC010809.1-201ENST00000560268 562 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 RN7SL32P-201ENST00000580514 281 ntBASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 AC016383.1-201ENST00000582700 714 ntTSL 3 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 AC127024.4-201ENST00000585212 308 ntTSL 5 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 LIPF-205ENST00000608620 1290 ntTSL 2 BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 HTR1DP1-201ENST00000616500 888 ntBASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 RNA5SP439-201ENST00000617595 124 ntBASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 MIR7854-201ENST00000620068 65 ntBASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 AC061999.1-201ENST00000624454 177 ntBASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 FGD6-205ENST00000549499 3757 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 NFX1-201ENST00000318524 3513 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
CCDC112Q8NEF3 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 CTXN3-201ENST00000379445 1660 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 CYBRD1-203ENST00000409484 1493 ntTSL 2 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 HDAC1P2-201ENST00000453661 1398 ntBASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AL591135.1-201ENST00000401578 5914 ntBASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 OR52H1-201ENST00000322653 1057 ntAPPRIS P1 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 MIR99A-201ENST00000384906 81 ntBASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AC245036.1-201ENST00000391727 309 ntBASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AC002511.2-201ENST00000413796 450 ntTSL 2 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AC073257.1-201ENST00000432474 523 ntTSL 4 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AC114402.2-201ENST00000432760 643 ntBASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 RPL3P11-201ENST00000434028 1146 ntBASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 WDR82P2-201ENST00000444540 928 ntBASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.87□□□□□ -1.31
CCDC112Q8NEF3 AC006947.1-201ENST00000457168 484 ntTSL 3 BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms