Protein–RNA interactions for Protein: Q6PI97

C11orf88, UPF0722 protein C11orf88, humanhuman

Predictions only

Length 169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88Q6PI97 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 DEPDC1B-201ENST00000265036 2499 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AC087516.2-201ENST00000558963 3042 ntTSL 3 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 CX3CR1-202ENST00000399220 3106 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AC011455.2-201ENST00000599320 3336 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 OR51I2-202ENST00000641930 3302 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 RALGAPA1P1-201ENST00000443361 6232 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 MAPK10-207ENST00000395166 3085 ntAPPRIS P2 TSL 2 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 LACRT-201ENST00000257867 551 ntAPPRIS P2 TSL 1 (best) BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 TMBIM4-201ENST00000286424 989 ntTSL 5 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 MT1A-201ENST00000290705 396 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 MTERF4-205ENST00000407095 799 ntTSL 2 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 RNA5SP251-201ENST00000410614 137 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 SPRY4-AS1-201ENST00000414314 521 ntTSL 3 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AC010148.1-201ENST00000427619 707 ntTSL 3 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AL445218.1-202ENST00000427695 845 ntTSL 3 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 OR5AC1-201ENST00000429239 925 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 HNRNPA1P18-201ENST00000433537 927 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 LINC01762-205ENST00000437308 539 ntTSL 3 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 DNAJC19P5-201ENST00000443295 316 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 CRYGGP-201ENST00000443337 145 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 LINC01376-204ENST00000449124 626 ntTSL 2 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 SNORA81.1-201ENST00000458922 177 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AC096576.2-201ENST00000511835 948 ntTSL 3 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 LINC02055-205ENST00000521090 774 ntTSL 3 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 IGHV1-14-201ENST00000523391 241 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AC109635.6-201ENST00000525487 1113 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 TAS2R46-201ENST00000533467 930 ntAPPRIS P1 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 NDUFA3P4-201ENST00000560814 250 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AC026458.1-201ENST00000564330 438 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AC134312.6-201ENST00000568587 444 ntTSL 5 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 ACTG1P15-201ENST00000570019 1063 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AC060766.1-201ENST00000590824 627 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AL078623.1-201ENST00000602702 907 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AC097467.4-201ENST00000605504 141 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AC093635.1-201ENST00000609028 555 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AL352984.2-202ENST00000613699 155 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 TCL6_3.1-201ENST00000619064 137 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AL359094.1-201ENST00000627944 566 ntTSL 5 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AC140479.4-205ENST00000636339 820 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 ADGRF5-201ENST00000265417 5668 ntAPPRIS P1 TSL 1 (best) BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 SAMM50P1-201ENST00000455403 1399 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 TET2-203ENST00000380013 9679 ntAPPRIS P2 TSL 5 BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AC067942.1-201ENST00000488045 1493 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 CNOT6LP1-201ENST00000559681 1462 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 CD96-203ENST00000438817 1565 ntTSL 1 (best) BASIC5.75□□□□□ -1.49
C11orf88Q6PI97 AC006484.1-201ENST00000435086 1884 ntBASIC5.75□□□□□ -1.49
C11orf88Q6PI97 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 DCX-206ENST00000496551 1320 ntAPPRIS P4 TSL 2 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 NPY5R-202ENST00000506953 1418 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 TCF4-290ENST00000638154 7801 ntAPPRIS ALT1 TSL 5 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 PPP1R1C-201ENST00000280295 1636 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 DDX6-207ENST00000617381 2883 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 RABL3-201ENST00000273375 3883 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 MAP3K20-AS1-203ENST00000423106 2538 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 OR5A1-201ENST00000302030 1051 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 OR4M1-201ENST00000315957 1116 ntAPPRIS P1 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 SAMD13-203ENST00000370670 565 ntAPPRIS P1 TSL 4 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 NUDT5-202ENST00000378937 919 ntTSL 3 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 RNU6-729P-201ENST00000384399 107 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 MIR551B-201ENST00000384984 96 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 RNA5SP53-201ENST00000391299 120 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 CHL1-AS1-201ENST00000417612 913 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 GLUD1P9-201ENST00000420997 1173 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 RFESDP1-201ENST00000422350 461 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 ZNF880-203ENST00000424032 558 ntTSL 4 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 GAPDHP57-201ENST00000424400 585 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 AL604028.2-201ENST00000437848 788 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 CYCSP44-201ENST00000448560 313 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 AC009244.1-201ENST00000450566 258 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 CEACAMP11-201ENST00000455211 583 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 RPSAP48-201ENST00000466509 889 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 AC096743.1-201ENST00000485172 319 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 RABGAP1L-216ENST00000486220 772 ntTSL 1 (best) BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 RN7SL561P-201ENST00000488553 281 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 ZNF525-204ENST00000491101 569 ntTSL 4 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 RN7SL306P-201ENST00000492941 296 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 RN7SL612P-201ENST00000497704 295 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 AC122714.1-201ENST00000502510 459 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 AC010425.1-201ENST00000511734 554 ntTSL 4 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 RNA5SP318-201ENST00000516352 92 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 C8orf37-AS1-201ENST00000517437 456 ntTSL 3 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 KCNU1-202ENST00000518904 334 ntTSL 2 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 GRPEL2-AS1-201ENST00000521295 401 ntTSL 3 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 AP005436.1-201ENST00000531454 488 ntTSL 2 BASIC5.74□□□□□ -1.49
C11orf88Q6PI97 AC027796.1-201ENST00000575593 512 ntBASIC5.74□□□□□ -1.49
C11orf88Q6PI97 MIR378H-201ENST00000579966 83 ntBASIC5.74□□□□□ -1.49
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms