Protein–RNA interactions for Protein: Q53GG5

PDLIM3, PDZ and LIM domain protein 3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM3Q53GG5 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 AL161757.4-202ENST00000557467 737 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 AC138207.8-206ENST00000580053 637 ntTSL 5 BASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 WBP1LP12-201ENST00000604449 331 ntBASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 AL035587.1-202ENST00000607218 984 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 AC109309.2-201ENST00000612597 332 ntBASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 MIR6886-201ENST00000619864 61 ntBASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 AC025262.3-201ENST00000623666 360 ntBASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 AF067845.4-201ENST00000633198 480 ntTSL 3 BASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 AC079776.5-201ENST00000641920 211 ntBASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 ZNF227-201ENST00000313040 3043 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 PAK3-202ENST00000360648 2241 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 NDUFS1-205ENST00000449699 2371 ntAPPRIS P1 TSL 2 BASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 AXDND1-201ENST00000367618 3642 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 SLC26A7-202ENST00000309536 2656 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 OSBPL1A-202ENST00000357041 1869 ntTSL 2 BASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 AL731556.1-201ENST00000394628 3711 ntBASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 PPFIA2-219ENST00000550359 3808 ntTSL 2 BASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 TTC33-207ENST00000637375 1824 ntTSL 5 BASIC5.53□□□□□ -1.52
PDLIM3Q53GG5 ACPP-201ENST00000336375 3125 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 HOXD8-202ENST00000429017 1608 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 ZNF720-202ENST00000398696 1339 ntTSL 4 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 FLG2-201ENST00000388718 9124 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC009120.2-204ENST00000621548 2032 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 OGT-201ENST00000373701 3310 ntAPPRIS ALT1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AMOT-206ENST00000524145 3330 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 EXO1-201ENST00000348581 3192 ntAPPRIS P3 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 ZBTB21-205ENST00000398511 5608 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 URI1-201ENST00000360605 1579 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 NPIPB15-201ENST00000429990 1428 ntAPPRIS P1 TSL 5 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 ADTRP-201ENST00000229583 891 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 CEP112-201ENST00000317442 1035 ntAPPRIS ALT2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 RN7SKP237-201ENST00000364663 301 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC007068.1-201ENST00000396690 844 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 ZNF385D-AS1-201ENST00000412369 705 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 Z93019.1-201ENST00000416450 973 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 ICA1L-206ENST00000418208 602 ntTSL 4 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AL445465.1-208ENST00000419709 506 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 LINC01497-201ENST00000420427 665 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AL353148.1-202ENST00000424701 551 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 CHCHD3P1-201ENST00000425516 676 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 RPS29P14-201ENST00000431518 171 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 MIR4432HG-201ENST00000441598 470 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 RPL21P33-201ENST00000444831 484 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 LINC01828-201ENST00000445514 531 ntTSL 4 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC234771.2-201ENST00000445718 597 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 STARD13-IT1-201ENST00000456087 452 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC016903.2-201ENST00000456384 326 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC084024.1-201ENST00000476186 621 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 EPDR1-204ENST00000476620 555 ntTSL 4 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 RPS27P20-201ENST00000492051 246 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC002401.2-201ENST00000511361 430 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC245519.1-201ENST00000522799 512 ntTSL 4 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 IGLVV-66-201ENST00000523818 341 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC010247.1-201ENST00000527895 759 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 ACRV1-203ENST00000530048 794 ntAPPRIS ALT2 TSL 3 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 OLR1-210ENST00000544577 924 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC069240.2-201ENST00000550242 609 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 PSMA6-204ENST00000553809 879 ntAPPRIS ALT1 TSL 3 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 PSMA6-214ENST00000556506 763 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC090971.3-201ENST00000557871 1041 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 LINC01917-201ENST00000565170 1037 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC010547.7-201ENST00000570323 333 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC211486.2-201ENST00000576046 280 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 MIR4732-201ENST00000581873 76 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 OR7A11P-201ENST00000597719 953 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC092944.2-201ENST00000605443 889 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC010333.3-201ENST00000615100 402 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 PRL-202ENST00000615510 1268 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 CDH19-203ENST00000540086 1963 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 ENKUR-201ENST00000331161 3382 ntAPPRIS P2 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 ADH1B-205ENST00000625860 4059 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 DHRS9-205ENST00000432060 1652 ntTSL 2 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC096992.2-201ENST00000609553 1684 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC007485.2-201ENST00000623493 1667 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 ZC3H8-208ENST00000615791 1527 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 SLC16A4-201ENST00000369779 2632 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AC093227.1-201ENST00000588040 1360 ntTSL 3 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 AP002370.1-201ENST00000528055 1602 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 FHL5-201ENST00000326771 2031 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 Z97989.1-201ENST00000531702 2421 ntBASIC5.52□□□□□ -1.53
PDLIM3Q53GG5 MSL3P1-202ENST00000440028 1468 ntBASIC5.51□□□□□ -1.53
PDLIM3Q53GG5 GJA10-203ENST00000638915 1479 ntAPPRIS ALT2 TSL 5 BASIC5.51□□□□□ -1.53
PDLIM3Q53GG5 LINC01606-203ENST00000519160 2292 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM3Q53GG5 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.51□□□□□ -1.53
PDLIM3Q53GG5 OSBPL9-205ENST00000447887 2940 ntTSL 2 BASIC5.51□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms