Protein–RNA interactions for Protein: P78406

RAE1, mRNA export factor, humanhuman

Known RBP Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAE1P78406 AC131953.1-201ENST00000513127 477 ntTSL 2 BASIC6.13□□□□□ -1.43
RAE1P78406 AC010230.1-201ENST00000514115 443 ntTSL 3 BASIC6.13□□□□□ -1.43
RAE1P78406 RNU6-415P-201ENST00000516252 97 ntBASIC6.13□□□□□ -1.43
RAE1P78406 IGKV1D-22-201ENST00000518953 324 ntBASIC6.13□□□□□ -1.43
RAE1P78406 IGLVIV-66-1-201ENST00000521832 460 ntBASIC6.13□□□□□ -1.43
RAE1P78406 IGHV1-14-201ENST00000523391 241 ntBASIC6.13□□□□□ -1.43
RAE1P78406 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.13□□□□□ -1.43
RAE1P78406 EBF2-204ENST00000535548 1017 ntTSL 2 BASIC6.13□□□□□ -1.43
RAE1P78406 AC005000.1-201ENST00000536192 288 ntBASIC6.13□□□□□ -1.43
RAE1P78406 AC025419.1-204ENST00000539653 745 ntTSL 3 BASIC6.13□□□□□ -1.43
RAE1P78406 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC6.13□□□□□ -1.43
RAE1P78406 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.13□□□□□ -1.43
RAE1P78406 AC134669.2-201ENST00000578584 1008 ntAPPRIS P1 TSL 2 BASIC6.13□□□□□ -1.43
RAE1P78406 AP005433.1-202ENST00000580845 521 ntTSL 4 BASIC6.13□□□□□ -1.43
RAE1P78406 AC093330.1-201ENST00000583326 568 ntTSL 4 BASIC6.13□□□□□ -1.43
RAE1P78406 AC090616.1-201ENST00000583895 447 ntBASIC6.13□□□□□ -1.43
RAE1P78406 AC008770.4-201ENST00000586394 468 ntTSL 3 BASIC6.13□□□□□ -1.43
RAE1P78406 C10orf82-203ENST00000588184 852 ntAPPRIS ALT2 TSL 3 BASIC6.13□□□□□ -1.43
RAE1P78406 AC005776.1-201ENST00000603164 290 ntBASIC6.13□□□□□ -1.43
RAE1P78406 AC004805.3-201ENST00000603178 310 ntBASIC6.13□□□□□ -1.43
RAE1P78406 LY86-AS1-206ENST00000607278 677 ntTSL 3 BASIC6.13□□□□□ -1.43
RAE1P78406 AC004836.1-201ENST00000623032 634 ntBASIC6.13□□□□□ -1.43
RAE1P78406 LINC02341-202ENST00000637462 1295 ntTSL 5 BASIC6.13□□□□□ -1.43
RAE1P78406 LEPR-205ENST00000371060 5135 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RAE1P78406 ZNF490-201ENST00000311437 4237 ntAPPRIS P1 TSL 1 (best) BASIC6.13□□□□□ -1.43
RAE1P78406 AL353743.3-201ENST00000442109 1468 ntBASIC6.13□□□□□ -1.43
RAE1P78406 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC6.13□□□□□ -1.43
RAE1P78406 MAPK10-287ENST00000641217 3037 ntBASIC6.13□□□□□ -1.43
RAE1P78406 BIN2P1-201ENST00000504996 1530 ntBASIC6.13□□□□□ -1.43
RAE1P78406 TESPA1-210ENST00000531122 1517 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
RAE1P78406 ZNF540-201ENST00000316433 3099 ntAPPRIS P3 TSL 1 (best) BASIC6.13□□□□□ -1.43
RAE1P78406 ZNF480-201ENST00000334564 1843 ntAPPRIS ALT2 TSL 2 BASIC6.13□□□□□ -1.43
RAE1P78406 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.13□□□□□ -1.43
RAE1P78406 ARHGAP20-203ENST00000527598 5998 ntAPPRIS ALT2 TSL 1 (best) BASIC6.13□□□□□ -1.43
RAE1P78406 CHRM3-AS2-201ENST00000427859 2431 ntTSL 1 (best) BASIC6.13□□□□□ -1.43
RAE1P78406 CNTN5-204ENST00000524871 6258 ntAPPRIS P4 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAE1P78406 OR4D11-201ENST00000313253 936 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RAE1P78406 AL591503.1-201ENST00000366224 477 ntTSL 5 BASIC6.12□□□□□ -1.43
RAE1P78406 TCF7L2-210ENST00000369397 3802 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAE1P78406 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC6.12□□□□□ -1.43
RAE1P78406 XAGE3-202ENST00000375491 489 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAE1P78406 CDKL4-201ENST00000378803 1567 ntAPPRIS P2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAE1P78406 OR5K3-201ENST00000383695 966 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RAE1P78406 ATF7IP2-204ENST00000396560 3665 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAE1P78406 AP003170.5-201ENST00000397185 335 ntBASIC6.12□□□□□ -1.43
RAE1P78406 AC104823.1-201ENST00000413290 989 ntTSL 2 BASIC6.12□□□□□ -1.43
RAE1P78406 OR52N3P-201ENST00000413417 934 ntBASIC6.12□□□□□ -1.43
RAE1P78406 PVALB-204ENST00000417718 569 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAE1P78406 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.12□□□□□ -1.43
RAE1P78406 CYP4F30P-202ENST00000420048 405 ntBASIC6.12□□□□□ -1.43
RAE1P78406 AC007568.1-201ENST00000422912 471 ntBASIC6.12□□□□□ -1.43
RAE1P78406 AL050344.1-201ENST00000424084 490 ntTSL 3 BASIC6.12□□□□□ -1.43
RAE1P78406 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC6.12□□□□□ -1.43
RAE1P78406 RPL31P11-201ENST00000426558 1558 ntBASIC6.12□□□□□ -1.43
RAE1P78406 AL121902.1-201ENST00000426963 459 ntTSL 2 BASIC6.12□□□□□ -1.43
RAE1P78406 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC6.12□□□□□ -1.43
RAE1P78406 TXNP2-201ENST00000443918 295 ntBASIC6.12□□□□□ -1.43
RAE1P78406 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.12□□□□□ -1.43
RAE1P78406 LDHBP2-201ENST00000456969 1005 ntBASIC6.12□□□□□ -1.43
RAE1P78406 AC063955.1-201ENST00000462872 685 ntBASIC6.12□□□□□ -1.43
RAE1P78406 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RAE1P78406 AC122714.1-201ENST00000502510 459 ntBASIC6.12□□□□□ -1.43
RAE1P78406 C1GALT1P2-201ENST00000510813 1104 ntBASIC6.12□□□□□ -1.43
RAE1P78406 CUL4AP1-201ENST00000514750 1863 ntBASIC6.12□□□□□ -1.43
RAE1P78406 SCARNA1-201ENST00000517138 166 ntBASIC6.12□□□□□ -1.43
RAE1P78406 AP003469.1-202ENST00000521884 478 ntTSL 2 BASIC6.12□□□□□ -1.43
RAE1P78406 AL133399.1-201ENST00000527476 298 ntBASIC6.12□□□□□ -1.43
RAE1P78406 CASC18-202ENST00000548557 2503 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RAE1P78406 AL096869.1-201ENST00000557622 559 ntTSL 4 BASIC6.12□□□□□ -1.43
RAE1P78406 AC103740.1-202ENST00000558404 542 ntTSL 4 BASIC6.12□□□□□ -1.43
RAE1P78406 CSNK1G1-202ENST00000561349 1756 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RAE1P78406 MTND1P8-201ENST00000571424 950 ntBASIC6.12□□□□□ -1.43
RAE1P78406 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC6.12□□□□□ -1.43
RAE1P78406 KYNUP2-201ENST00000582280 1329 ntBASIC6.12□□□□□ -1.43
RAE1P78406 RN7SL475P-201ENST00000583379 298 ntBASIC6.12□□□□□ -1.43
RAE1P78406 MIR3159-201ENST00000584572 74 ntBASIC6.12□□□□□ -1.43
RAE1P78406 AC005702.3-201ENST00000585345 1447 ntBASIC6.12□□□□□ -1.43
RAE1P78406 CHMP1B-AS1-201ENST00000586474 553 ntTSL 4 BASIC6.12□□□□□ -1.43
RAE1P78406 AC012254.2-203ENST00000588705 561 ntAPPRIS P5 TSL 2 BASIC6.12□□□□□ -1.43
RAE1P78406 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC6.12□□□□□ -1.43
RAE1P78406 LAPTM4BP2-201ENST00000604542 446 ntBASIC6.12□□□□□ -1.43
RAE1P78406 PSMC6-218ENST00000606149 1560 ntAPPRIS ALT1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAE1P78406 MIR6085-201ENST00000618314 110 ntBASIC6.12□□□□□ -1.43
RAE1P78406 AC006511.3-201ENST00000624929 1783 ntBASIC6.12□□□□□ -1.43
RAE1P78406 AL358975.1-202ENST00000628133 589 ntTSL 5 BASIC6.12□□□□□ -1.43
RAE1P78406 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC6.12□□□□□ -1.43
RAE1P78406 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC6.12□□□□□ -1.43
RAE1P78406 AL049767.1-201ENST00000636811 514 ntTSL 5 BASIC6.12□□□□□ -1.43
RAE1P78406 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RAE1P78406 ATP5S-202ENST00000311459 10212 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RAE1P78406 SMC1A-202ENST00000375340 9930 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RAE1P78406 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC6.12□□□□□ -1.43
RAE1P78406 GPR155-206ENST00000614352 7321 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RAE1P78406 MEPE-209ENST00000560249 2206 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAE1P78406 WBP11P1-201ENST00000562560 1931 ntBASIC6.11□□□□□ -1.43
RAE1P78406 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RAE1P78406 AKAP6-213ENST00000557354 5259 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RAE1P78406 CLEC9A-201ENST00000355819 1734 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RAE1P78406 ZNF735-201ENST00000429565 1570 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RAE1P78406 CR1-203ENST00000367051 7469 ntTSL 5 BASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms