Protein–RNA interactions for Protein: P61024

CKS1B, Cyclin-dependent kinases regulatory subunit 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP61024 AC023141.1-201ENST00000419418 379 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 LINC00433-201ENST00000424165 888 ntTSL 2 BASIC4.45□□□□□ -1.7
CKS1BP61024 AC006013.1-201ENST00000424888 758 ntTSL 3 BASIC4.45□□□□□ -1.7
CKS1BP61024 SNRPEP5-201ENST00000425442 278 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 RPS27AP6-201ENST00000427962 448 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 MTND6P12-201ENST00000428247 522 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 BX276092.6-201ENST00000430476 250 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 AL138733.2-201ENST00000431947 804 ntTSL 5 BASIC4.45□□□□□ -1.7
CKS1BP61024 FTLP17-201ENST00000432567 525 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC4.45□□□□□ -1.7
CKS1BP61024 AC009518.3-201ENST00000438972 253 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 ZNF138-205ENST00000440155 1066 ntAPPRIS P3 TSL 2 BASIC4.45□□□□□ -1.7
CKS1BP61024 AL512785.1-201ENST00000447899 517 ntTSL 3 BASIC4.45□□□□□ -1.7
CKS1BP61024 AC016722.1-201ENST00000453936 652 ntTSL 5 BASIC4.45□□□□□ -1.7
CKS1BP61024 BX276092.8-201ENST00000455722 250 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 AC128689.1-201ENST00000466206 562 ntTSL 4 BASIC4.45□□□□□ -1.7
CKS1BP61024 AC083806.1-201ENST00000468934 316 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 UCK2-206ENST00000470820 1083 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 AL928654.1-201ENST00000476081 354 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 ZNF138-207ENST00000494380 842 ntTSL 2 BASIC4.45□□□□□ -1.7
CKS1BP61024 AC091965.3-201ENST00000506236 208 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC4.45□□□□□ -1.7
CKS1BP61024 GAPDHP71-201ENST00000511530 1003 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 AC021242.2-202ENST00000522129 545 ntTSL 4 BASIC4.45□□□□□ -1.7
CKS1BP61024 AC021820.1-201ENST00000525564 808 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 AP005639.1-201ENST00000526939 192 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 AP001646.2-201ENST00000528645 1156 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 NDUFA3P2-201ENST00000531434 232 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 AC022075.3-201ENST00000539009 649 ntTSL 3 BASIC4.45□□□□□ -1.7
CKS1BP61024 AP002373.2-201ENST00000541631 1060 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 ELK3-206ENST00000552142 1242 ntTSL 5 BASIC4.45□□□□□ -1.7
CKS1BP61024 AL358913.1-201ENST00000554342 121 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 AL445383.1-201ENST00000554689 874 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 NR2F2-AS1-205ENST00000559505 1005 ntTSL 5 BASIC4.45□□□□□ -1.7
CKS1BP61024 LINC01892-201ENST00000579141 507 ntTSL 3 BASIC4.45□□□□□ -1.7
CKS1BP61024 NDUFA3P1-201ENST00000588007 252 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 AC011921.2-201ENST00000589465 152 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 AC011487.2-201ENST00000600193 1228 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 SOX9-AS1-216ENST00000602213 821 ntTSL 5 BASIC4.45□□□□□ -1.7
CKS1BP61024 AC005070.2-201ENST00000604391 260 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 AC113361.1-201ENST00000606683 543 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 EDRF1-AS1-214ENST00000622798 526 ntTSL 5 BASIC4.45□□□□□ -1.7
CKS1BP61024 AC087894.3-201ENST00000623682 349 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 AC073263.3-201ENST00000624449 858 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 LINC00850-201ENST00000629221 685 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 OR5P3-202ENST00000641167 1193 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CKS1BP61024 OR8G5-202ENST00000641707 1156 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
CKS1BP61024 OR5AU1-204ENST00000641822 1197 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
CKS1BP61024 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 CLEC1B-204ENST00000428126 3054 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 RC3H1-202ENST00000367694 3775 ntAPPRIS ALT1 TSL 2 BASIC4.45□□□□□ -1.7
CKS1BP61024 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CKS1BP61024 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
CKS1BP61024 PWRN1-211ENST00000568609 1443 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 RNF217-201ENST00000359704 1784 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 AC096992.2-201ENST00000609553 1684 ntBASIC4.45□□□□□ -1.7
CKS1BP61024 BANK1-206ENST00000504592 3544 ntTSL 2 BASIC4.45□□□□□ -1.7
CKS1BP61024 AC005674.2-201ENST00000561486 3510 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
CKS1BP61024 SMG1P4-204ENST00000523028 4131 ntBASIC4.44□□□□□ -1.7
CKS1BP61024 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC4.44□□□□□ -1.7
CKS1BP61024 AL512329.1-201ENST00000404600 1592 ntBASIC4.44□□□□□ -1.7
CKS1BP61024 SLCO1B7-201ENST00000421593 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CKS1BP61024 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CKS1BP61024 NUP153-201ENST00000262077 5487 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CKS1BP61024 CDC5L-201ENST00000371477 6423 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
CKS1BP61024 OFD1P9Y-201ENST00000417699 1491 ntBASIC4.44□□□□□ -1.7
CKS1BP61024 CEACAM1-201ENST00000161559 3519 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
CKS1BP61024 EEF1A1P9-201ENST00000514975 1383 ntBASIC4.44□□□□□ -1.7
CKS1BP61024 RASSF8-213ENST00000542865 2219 ntAPPRIS P1 TSL 2 BASIC4.44□□□□□ -1.7
CKS1BP61024 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.44□□□□□ -1.7
CKS1BP61024 MYBPC1-207ENST00000545503 3569 ntAPPRIS ALT2 TSL 1 (best) BASIC4.44□□□□□ -1.7
CKS1BP61024 C14orf177-201ENST00000325812 1284 ntAPPRIS P2 TSL 2 BASIC4.44□□□□□ -1.7
CKS1BP61024 ATF3-201ENST00000336937 482 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CKS1BP61024 SNORA30B-201ENST00000365319 129 ntBASIC4.44□□□□□ -1.7
CKS1BP61024 BMS1P3-201ENST00000372011 932 ntBASIC4.44□□□□□ -1.7
CKS1BP61024 CNTRL-202ENST00000373844 713 ntTSL 3 BASIC4.44□□□□□ -1.7
CKS1BP61024 PRB3-201ENST00000381842 1091 ntAPPRIS ALT2 TSL 5 BASIC4.44□□□□□ -1.7
CKS1BP61024 IGKV3-7-201ENST00000390247 445 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
CKS1BP61024 AL451061.1-201ENST00000407887 862 ntBASIC4.44□□□□□ -1.7
CKS1BP61024 CCR8-202ENST00000414803 1078 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CKS1BP61024 AL390195.1-202ENST00000416099 723 ntTSL 2 BASIC4.44□□□□□ -1.7
CKS1BP61024 AC109638.1-201ENST00000417406 326 ntBASIC4.44□□□□□ -1.7
CKS1BP61024 CYP4F34P-201ENST00000425951 481 ntBASIC4.44□□□□□ -1.7
CKS1BP61024 AL645936.2-201ENST00000430565 928 ntBASIC4.44□□□□□ -1.7
CKS1BP61024 ARPP21-217ENST00000436702 561 ntTSL 4 BASIC4.44□□□□□ -1.7
CKS1BP61024 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC4.44□□□□□ -1.7
CKS1BP61024 SCDP1-201ENST00000455244 1081 ntBASIC4.44□□□□□ -1.7
CKS1BP61024 RN7SL515P-201ENST00000463999 297 ntBASIC4.44□□□□□ -1.7
CKS1BP61024 AC073288.1-201ENST00000466291 469 ntTSL 3 BASIC4.44□□□□□ -1.7
CKS1BP61024 AC068647.2-202ENST00000485020 390 ntTSL 3 BASIC4.44□□□□□ -1.7
CKS1BP61024 ANK3-213ENST00000486349 493 ntTSL 2 BASIC4.44□□□□□ -1.7
CKS1BP61024 AC114728.1-201ENST00000488289 483 ntBASIC4.44□□□□□ -1.7
CKS1BP61024 RN7SL314P-201ENST00000490735 292 ntBASIC4.44□□□□□ -1.7
CKS1BP61024 LINC01098-201ENST00000507870 1034 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
CKS1BP61024 CC2D2A-207ENST00000507954 548 ntAPPRIS ALT2 TSL 2 BASIC4.44□□□□□ -1.7
CKS1BP61024 AC117383.2-201ENST00000514722 322 ntBASIC4.44□□□□□ -1.7
CKS1BP61024 OXR1-212ENST00000521592 993 ntTSL 5 BASIC4.44□□□□□ -1.7
CKS1BP61024 AP003548.1-201ENST00000523862 711 ntTSL 3 BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms